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How to use validate_column method in pandera

Best Python code snippet using pandera_python

services.py

Source:services.py

...118    def __init__(self, row, index):119        self.row = row120        self.index = index121        self.row_errors = []122    def validate_column(self, validator_method, col):123        """124        validates an individual column with the validator method passed125        returns true or add error message to the list126        """127        try:128            validator_method(col)129        except ValidationError as exc:130            self.row_errors.append(f"Row Index {self.index+1}: " + exc.message)131    def validate_row(self):132        """133        Return true if all columns of a row have valid data, false otherwise134        """135        self.validate_column(136            validate_username, self.row['username'])137        self.validate_column(138            validate_email, self.row['email'])139        self.validate_column(140            validate_date_of_birth, self.row['date_of_birth'])141        self.validate_column(142            validate_phone_number, self.row['phone_number'])143        self.validate_column(144            validate_blood_group, self.row['blood_group'])...

data_quality.py

Source:data_quality.py

1from airflow.hooks.postgres_hook import PostgresHook2from airflow.models import BaseOperator3from airflow.utils.decorators import apply_defaults4#DataQuality Opeator to validate the records loaded into dimension & fact tables5class DataQualityOperator(BaseOperator):6    ui_color = '#89DA59'7    @apply_defaults8    def __init__(self,9                 redshift_connection_id,10                 target_table,11                 validate_column,12                 *args, **kwargs):13        '''14            DataQualityOperator init constructor15            arguments:16                redshift_conn_id -- redshift connection id 17                target_table -- target table where data validation need to happen18                validate_column - column in which validation need to be applied19        '''20        super(DataQualityOperator, self).__init__(*args, **kwargs)21        self.redshift_connection_id = redshift_connection_id22        self.target_table = target_table23        self.validate_column = validate_column 24    def execute(self, context):25        '''26            execute gets called when DataQualityOperator is invoked27        '''28        self.log.info('Inside DataQualityOperator --->>>>')29        redshift = PostgresHook(self.redshift_connection_id)30        31        #Validation 1 - Check if table contains records32        for table in self.target_table:33            self.log.info(f"Executing record count validation for table : {table}")34            data_valid_sql = f"SELECT COUNT(*) FROM {table}"35            result = redshift.get_records(data_valid_sql)36            if len(result) < 1 or len(result[0]) < 1:37                raise ValueError(f"Data quality check failed: {table} select returned no results")38            num_records = result[0][0]39            if num_records < 1:40                raise ValueError(f"Data quality check failed: {table} contain 0 rows")41            self.log.info(f"Record count check passed and table {table} contains # {num_records}")42        43        #Validation 2 - Check selected field contains any null values, incase of null throws an error 44        for index, table in enumerate(self.target_table):45            self.log.info(f"Executing column null validation for table:{table} and column:{self.validate_column[index]}")46            data_valid_sql_1 = f"select count(1) from {table} where {self.validate_column[index]} is null"47            print(data_valid_sql_1)48            records = redshift.get_records(data_valid_sql_1)49            print("records value {}".format(records[0][0]))50            if records and records[0][0]> 0 :51                raise ValueError(f"Data quality check failed. {table} contains {len(records)} null records in column {self.validate_column[index]}")52            self.log.info(f"Null validation check passed for table:{table} and column:{self.validate_column[index]}")53            ...

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