How to use test_presenter method in SeleniumBase

Best Python code snippet using SeleniumBase

test_presenter.py

Source:test_presenter.py

1import unittest2from .read import Read3from .alignment import Alignment4from .reference import Reference5from .presenter import Presenter6class TestPresenter(unittest.TestCase):7    def create_aligned_pairs(self, read_sequence, reference_positions):8        return tuple(zip(range(len(read_sequence)), reference_positions))9    def create_test_reference(self, name):10        self.n20 = "aaaatttc"11        self.sequence = "tactactacaaaatttccggt"12        self.pam = "ngg"13        reference_positions_a = [8, None, None, None, 9, 10, 11, None, None, None, None, 12, 13, 14]14        seq_a = "ctttaaattttatt"15        read_a = Read("a", reference_positions_a, seq_a, self.create_aligned_pairs(seq_a, reference_positions_a))16        reference_positions_b = [10, 15]17        seq_b = "at"18        read_b = Read("b", reference_positions_b, seq_b, ((0,10),(None, 11), (None, 12), (None, 13), (None, 14), (1, 15)))19        reference_positions_c = [10, 11, 12, 13, 14]20        seq_c = "aaatt"21        read_c = Read("c", reference_positions_c, seq_a, self.create_aligned_pairs(seq_c, reference_positions_c))22        reference_positions_d = [6, 7, 8, 9, 10, 11, 12, 13, None, None, None, None, 14]23        seq_d = "tacaaaattggggt"24        read_d = Read("d", reference_positions_d, seq_d, self.create_aligned_pairs(seq_d, reference_positions_d))25        reference_positions_e = [18, 20]26        seq_e = "gt"27        read_e = Read("e", reference_positions_e, seq_e, ((0,18),(None, 19),(1,20)))28        reference_positions_f = [None, None, None, 0, 1, 2]29        seq_f = "gggtac"30        read_f = Read("f", reference_positions_f, seq_f, self.create_aligned_pairs(seq_f, reference_positions_f))31        reads = [read_a, read_b, read_c, read_d, read_e, read_f]32        return Reference(name, self.n20, self.sequence, self.pam, reads)33    def test_reference_presenter_results(self):34        references = [self.create_test_reference("foo"), self.create_test_reference("bar")]35        test_presenter = Presenter(references)36        results = test_presenter.present()37        self.assertEqual(len(results), 2)38        self.assertEqual(results[0].sequence(), self.sequence.upper())39        self.assertEqual(results[0].n20(), self.n20.upper())40        self.assertEqual(results[0].pam(), self.pam.upper())41        self.assertEqual(results[0].name(), "foo")42        self.assertEqual(len(results[0].mutation_clusters), 1)43        self.assertEqual(results[0].total_reads(), 6)44        self.assertEqual(results[1].sequence(), self.sequence.upper())45        self.assertEqual(results[1].n20(), self.n20.upper())46        self.assertEqual(results[1].pam(), self.pam.upper())47        self.assertEqual(results[1].name(), "bar")48        self.assertEqual(len(results[1].mutation_clusters), 1)49        self.assertEqual(results[1].total_reads(), 6)50    def test_cluster_results(self):51        references = [self.create_test_reference("foo")]52        test_presenter = Presenter(references)53        results = test_presenter.present()54        mutation_clusters = results[0].mutation_clusters55        self.assertEqual(mutation_clusters[0].count(), 1)56        expected = [('A___||_T', 'A___||_T', 'AAAT||TT')]57        actual = []58        for cluster in mutation_clusters:59            got = (cluster.cas9_region.read, cluster.alignments[0].read, cluster.alignments[0].reference)60            actual.append(got)...

ringmaster_test_support.py

Source:ringmaster_test_support.py

1"""Test support code for testing Ringmasters."""2from collections import defaultdict3from cStringIO import StringIO4from gomill import ringmasters5from gomill import ringmaster_presenters6class Test_presenter(ringmaster_presenters.Presenter):7    """Presenter which stores the messages."""8    def __init__(self):9        ringmaster_presenters.Presenter.__init__(self)10        self.channels = defaultdict(list)11    shows_warnings_only = False12    def clear(self, channel):13        self.channels[channel] = []14    def say(self, channel, s):15        self.channels[channel].append(s)16    def refresh(self):17        pass18    def recent_messages(self, channel):19        """Retrieve messages sent since the channel was last cleared.20        Returns a list of strings.21        """22        return self.channels[channel][:]23class Testing_ringmaster(ringmasters.Ringmaster):24    """Variant of ringmaster suitable for use in tests.25    This doesn't read from or write to the filesystem.26    (If you're testing run(), make sure record_games is False, and either27    stderr_to_log is False, or else discard_stderr is True for each player.)28    (Currently, write_status is made to do nothing, so it's not usefully29    testable.)30    Instantiate with the control file contents as an 8-bit string.31    It will act as if the control file had been loaded from32    /nonexistent/ctl/test.ctl.33    You'll want to run set_display_mode('test') with this.34    """35    def __init__(self, control_file_contents):36        self._control_file_contents = control_file_contents37        self._test_status = None38        self._written_status = None39        ringmasters.Ringmaster.__init__(self, '/nonexistent/ctl/test.ctl')40        self.set_stdout(StringIO())41    _presenter_classes = {42        'test' : Test_presenter,43        }44    def _open_files(self):45        self.logfile = StringIO()46        self.historyfile = StringIO()47    def _close_files(self):48        # Don't want to close the StringIOs49        pass50    def _read_control_file(self):51        return self._control_file_contents52    def set_test_status(self, test_status):53        """Specify the value that will be loaded from the state file.54        test_status -- fake state file contents55        test_status should be a pair (status_format_version, status dict)56        """57        self._test_status = test_status58    def _load_status(self):59        return self._test_status60    def status_file_exists(self):61        return (self._test_status is not None)62    def _write_status(self, value):63        self._written_status = value64    def retrieve_printed_output(self):...

Automation Testing Tutorials

Learn to execute automation testing from scratch with LambdaTest Learning Hub. Right from setting up the prerequisites to run your first automation test, to following best practices and diving deeper into advanced test scenarios. LambdaTest Learning Hubs compile a list of step-by-step guides to help you be proficient with different test automation frameworks i.e. Selenium, Cypress, TestNG etc.