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How to use get_field_dict method in autotest
Best Python code snippet using autotest_python
test_behaviors.py
Source:test_behaviors.py 
...55 seo_title = 'name'56 class SharedModel2(SEO):57 class SEO:58 seo_title = 'asdf'59 get_field_dict(SharedModel1)['name']60 get_field_dict(SharedModel2)['asdf']61class TestMultiInheritMRO(unittest.TestCase):62 def test_improper_mro_multi_inheritance(self):63 class UpperBase(models.Model):64 pass65 with self.assertRaises(ImproperlyConfigured):66 class MultiInherited(UpperBase, Behavior):67 pass68 def test_proper_mro_multi_inheritance(self):69 class UpperBase(models.Model):70 pass71 class MultiInherited(Behavior, UpperBase):72 pass73def get_field_dict(model):74 """75 Make a dictionary of field name -> field class76 """77 return dict((field.name, field) for field in model._meta.fields)78class TestTimestampable(unittest.TestCase):79 def test_bare(self):80 class TestModel(Timestampable):81 pass82 x = TestModel()83 fields = get_field_dict(x)84 self.assertTrue(isinstance(fields['created_at'], models.DateTimeField))85 self.assertTrue(isinstance(fields['updated_at'], models.DateTimeField))86 #@unittest.expectedFailure87 #def test_same_name(self):88 # # This is actually a problem with django, it won't let you have two89 # # model classes with the same name in the same app90 # class TestModel(Timestampable):91 # class Timestampable:92 # created_at = 'asdf'93 #94 # x = TestModel()95 #96 # fields = get_field_dict(x)97 #98 # self.assertTrue(isinstance(fields['asdf'], models.DateTimeField))99 # self.assertTrue(isinstance(fields['updated_at'], models.DateTimeField))100 def test_custom(self):101 # This tests fails if the models share a name. see test_same_name102 class Test2Model(Timestampable):103 class Timestampable:104 created_at = 'asdf'105 x = Test2Model()106 fields = get_field_dict(x)107 self.assertTrue(isinstance(fields['asdf'], models.DateTimeField))108 self.assertTrue(isinstance(fields['updated_at'], models.DateTimeField))109 def test_proxy(self):110 class TestProxyParentModel(Timestampable):111 pass112 class TestProxyProxyModel(TestProxyParentModel):113 class Meta:114 proxy = True115 field_names = [i.attname for i in TestProxyProxyModel._meta.fields]116 # without careful treatment, proxy models117 # could have fields added twice. verify that118 # there are no duplicate field names.119 self.assertTrue(len(set(field_names)) == len(field_names))120class TestValidation(unittest.TestCase):121 def test_bare(self):122 class ValidationTestModel(Validation):123 foo = models.CharField(max_length=1)124 def validate(self):125 raise ValidationError('Generic Error')126 def validate_foo(self):127 raise ValidationError('Foo Error')128 x = ValidationTestModel()129 self.assertFalse(x.is_valid())130 self.assertIsInstance(x.validation_errors(), dict)131 expected_errors = {132 NON_FIELD_ERRORS: [u'Generic Error'],133 'foo': [u'This field cannot be blank.', u'Foo Error']134 }135 self.assertEqual(x.validation_errors(), expected_errors)136 try:137 x.save()138 self.assertTrue(False)139 except ValidationError:140 pass141class TestMergedQuerySet(unittest.TestCase):142 def test_bare(self):143 from django.db.models.query import QuerySet144 class QuerySetTestModel_A(models.Model):145 class QuerySet(QuerySet):146 def foo(self):147 pass148 class QuerySetTestModel_B(models.Model):149 class QuerySet(QuerySet):150 def bar(self):151 pass152 class QuerySetTestModel_C(ManagedQuerySet, QuerySetTestModel_A, QuerySetTestModel_B):153 class QuerySet(QuerySet):154 def baz(self):155 pass156 x = QuerySetTestModel_C()157 self.assertTrue(hasattr(x.QuerySet, 'foo'))158 self.assertTrue(hasattr(x.QuerySet, 'bar'))159 self.assertTrue(hasattr(x.QuerySet, 'baz'))160class TestSEO(unittest.TestCase):161 def test_bare(self):162 class Test3Model(SEO):163 pass164 x = Test3Model()165 fields = get_field_dict(x)166 self.assertTrue(isinstance(fields['seo_title'], models.CharField))167 self.assertTrue(isinstance(fields['seo_description'], models.TextField))168 self.assertTrue(isinstance(fields['seo_keywords'], models.TextField))169 def test_overridden_field(self):170 class Test14Model(SEO):171 seo_title = models.IntegerField()172 x = Test14Model()173 fields = get_field_dict(x)174 self.assertTrue(isinstance(fields['seo_title'], models.IntegerField))175 self.assertTrue(isinstance(fields['seo_description'], models.TextField))176 self.assertTrue(isinstance(fields['seo_keywords'], models.TextField))177 def test_nonsense_config(self):178 class Test13Model(SEO):179 blahblah = 'foo'180 asdf = models.CharField(max_length=255)181 x = Test13Model()182 fields = get_field_dict(x)183 self.assertTrue(isinstance(fields['seo_title'], models.CharField))184 self.assertTrue(isinstance(fields['seo_description'], models.TextField))185 self.assertTrue(isinstance(fields['seo_keywords'], models.TextField))186 def test_override(self):187 class Test4Model(SEO):188 class SEO:189 seo_title = 'foo'190 x = Test4Model()191 fields = get_field_dict(x)192 self.assertTrue(isinstance(fields['foo'], models.CharField))193 self.assertTrue(isinstance(fields['seo_description'], models.TextField))194 self.assertTrue(isinstance(fields['seo_keywords'], models.TextField))195 def test_deep_inheritance(self):196 class ParentModel(SEO):197 class SEO:198 seo_title = 'foo'199 class Test7Model(ParentModel):200 class SEO:201 seo_keywords = 'asdfasdf'202 x = Test7Model()203 fields = get_field_dict(x)204 self.assertTrue(isinstance(fields['foo'], models.CharField))205 self.assertTrue(isinstance(fields['seo_description'], models.TextField))206 self.assertTrue(isinstance(fields['asdfasdf'], models.TextField))207 def test_deep_inheritance_abstract(self):208 class ParentModelAbstract(SEO):209 class SEO:210 seo_title = 'foo'211 class Meta:212 abstract = True213 class Test8Model(ParentModelAbstract):214 class SEO:215 seo_keywords = 'asdfasdf'216 x = Test8Model()217 fields = get_field_dict(x)218 self.assertTrue(isinstance(fields['foo'], models.CharField))219 self.assertTrue(isinstance(fields['seo_description'], models.TextField))220 self.assertTrue(isinstance(fields['asdfasdf'], models.TextField))221 def test_deep_inheritance_settings(self):222 class ParentModelNoSettings(SEO):223 class Meta:224 abstract = True225 class Test9Model(ParentModelNoSettings):226 class SEO:227 seo_keywords = 'asdfasdf'228 x = Test9Model()229 fields = get_field_dict(x)230 self.assertTrue(isinstance(fields['seo_title'], models.CharField))231 self.assertTrue(isinstance(fields['seo_description'], models.TextField))232 self.assertTrue(isinstance(fields['asdfasdf'], models.TextField))233class TestTwoBehaviors(unittest.TestCase):234 def test_bare(self):235 class Test5Model(SEO, Timestampable):236 pass237 x = Test5Model()238 fields = get_field_dict(x)239 self.assertTrue(isinstance(fields['seo_title'], models.CharField))240 self.assertTrue(isinstance(fields['seo_description'], models.TextField))241 self.assertTrue(isinstance(fields['seo_keywords'], models.TextField))242 self.assertTrue(isinstance(fields['created_at'], models.DateTimeField))243 self.assertTrue(isinstance(fields['updated_at'], models.DateTimeField))244 def test_override(self):245 class Test6Model(SEO, Timestampable):246 class SEO:247 seo_title = 'asdf'248 class Timestampable:249 updated_at = 'foo'250 pass251 x = Test6Model()252 fields = get_field_dict(x)253 self.assertTrue(isinstance(fields['asdf'], models.CharField))254 self.assertTrue(isinstance(fields['seo_description'], models.TextField))255 self.assertTrue(isinstance(fields['seo_keywords'], models.TextField))256 self.assertTrue(isinstance(fields['created_at'], models.DateTimeField))257 self.assertTrue(isinstance(fields['foo'], models.DateTimeField))258 def test_new_behavior(self):259 class SeoAndTime(SEO, Timestampable):260 class SEO:261 seo_title = 'seo_and_time_title'262 pass263 class Test10Model(SeoAndTime):264 class Timestampable:265 updated_at = 'asdf'266 class SEO:267 seo_description = 'foo'268 x = Test10Model()269 fields = get_field_dict(x)270 self.assertTrue(isinstance(fields['seo_and_time_title'], models.CharField))271 self.assertTrue(isinstance(fields['foo'], models.TextField))272 self.assertTrue(isinstance(fields['seo_keywords'], models.TextField))273 self.assertTrue(isinstance(fields['created_at'], models.DateTimeField))274 self.assertTrue(isinstance(fields['asdf'], models.DateTimeField))275 def test_namespacings(self):276 class SeoAndTime2(SEO, Timestampable):277 class SEO:278 seo_title = 'seo_and_time_title'279 pass280 class Test11Model(SeoAndTime2):281 class Timestampable:282 seo_description = 'asdf'283 x = Test11Model()284 fields = get_field_dict(x)285 self.assertTrue(isinstance(fields['seo_and_time_title'], models.CharField))286 self.assertTrue(isinstance(fields['seo_description'], models.TextField))287 self.assertTrue(isinstance(fields['seo_keywords'], models.TextField))288 self.assertTrue(isinstance(fields['created_at'], models.DateTimeField))...
make_tiledb_metadata_file.py
Source:make_tiledb_metadata_file.py
...40 outf.write('\t'+task_dict[task][field])41 except:42 print("not found:"+field+'\t'+task_dict[task]['cromwell_id']+'\t'+task)43 outf.write('\tNA')44def get_field_dict(text_field,args_field,task_dict,id_to_task):45 if args_field is None:46 for task in task_dict: 47 task_dict[task][text_field]=None48 else:49 for line in open(args_field,'r').read().strip().split('\n'):50 tokens=line.split('/')51 for token in tokens:52 if token in id_to_task:53 cur_task=id_to_task[token]54 if cur_task not in task_dict:55 task_dict[cur_task]=dict()56 task_dict[cur_task]['cromwell_id']=token 57 task_dict[cur_task][text_field]=line58 break59 return task_dict 60def main():61 args=parse_args()62 #create a dictionary of cromwell hash values to encode id's 63 id_to_task=pd.read_csv(args.id_to_task,header=None,sep='\t',index_col=0).to_dict()[1]64 65 #create a dictionary to keep track of task files66 task_dict=dict()67 #iterate through each of the fields68 task_dict=get_field_dict('fc_bigwig',args.fc_bigwig,task_dict,id_to_task)69 #print(task_dict)70 #print("parsed fc_bigwig") 71 task_dict=get_field_dict('pval_bigwig',args.pval_bigwig,task_dict,id_to_task)72 #print("parsed pval_bigwig")73 task_dict=get_field_dict('count_bigwig_plus_5p',args.count_bigwig_plus_5p,task_dict,id_to_task)74 #print("parsed count_bigwig_plus_5p") 75 task_dict=get_field_dict('count_bigwig_minus_5p',args.count_bigwig_minus_5p,task_dict,id_to_task)76 #print("parsed count_bigwig_minus_5p")77 task_dict=get_field_dict('count_bigwig_unstranded_5p',args.count_bigwig_unstranded_5p,task_dict,id_to_task)78 #print("parsed count_bigwig_unstranded_5p")79 task_dict=get_field_dict('idr_peak',args.idr_peak,task_dict,id_to_task)80 #print("parsed idr_peak") 81 task_dict=get_field_dict('overlap_peak',args.overlap_peak,task_dict,id_to_task)82 #print("parsed overlap_peak") 83 task_dict=get_field_dict('ambig_peak',args.ambig_peak,task_dict,id_to_task)84 #print("parsed ambig_peak")85 #print(task_dict)86 #generate output file(s)87 #pdb.set_trace() 88 if args.split_tasks_to_separate_files is True:89 for task in task_dict:90 write_output_file_per_task(args,task_dict,task)91 else:92 write_output_file_all_tasks(args,task_dict)93 94 95 96if __name__=="__main__":97 main()...
csv_parse.py
Source:csv_parse.py
...20def cmp_total_with_value_dict(table, field_dict):21 for field_name in table.field_name_list:22 if table.__getattribute__(field_name) != field_dict[field_name]:23 msg = "%s.%s does not match at field[%s]. table value[%s], db value[%s]." % (table.db_name, table.table_name, field_name, table.__getattribute__(field_name), field_dict[field_name])24 msg += "\ntable:" + table.get_field_dict().__str__()25 msg += "\ndb:" + field_dict.__str__()26 return False, msg27 return True, ""28def get_primary_key_value_dict(table):29 if len(table.primary_key_value_dict) == 0:30 for field_name in table.primary_key_name_list:31 table.primary_key_value_dict[field_name] = table.__getattribute__(field_name)32 return table.primary_key_value_dict33def get_field_dict(table):34 if len(table.field_dict) == 0:35 for field_name in table.field_name_list:36 table.field_dict[field_name] = table.__getattribute__(field_name)37 return table.field_dict38def parse_one_csv_file(file_path, db_name, table_name, tables, primary_key_name_list):39 tables[table_name] = []40 row = 041 Table = type(table_name, (object,), {})42 for line in open(file_path, "r"):43 line = common_utils.try_gbk2utf8(line)44 line = common_utils.trim_return(line)45 fields = line.split(",")46 if row == 0:47 Table.db_name = db_name...
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