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How to use workdir method in avocado

Best Python code snippet using avocado_python

master.cfg

Source:master.cfg

1# -*- python -*-2# Task Coach - Your friendly task manager3# Copyright (C) 2004-2016 Task Coach developers <developers@taskcoach.org>4#5# Task Coach is free software: you can redistribute it and/or modify6# it under the terms of the GNU General Public License as published by7# the Free Software Foundation, either version 3 of the License, or8# (at your option) any later version.9#10# Task Coach is distributed in the hope that it will be useful,11# but WITHOUT ANY WARRANTY; without even the implied warranty of12# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the13# GNU General Public License for more details.14#15# You should have received a copy of the GNU General Public License16# along with this program.  If not, see <http://www.gnu.org/licenses/>.17c = BuildmasterConfig = {}18REPOURL = 'http://hg.code.sf.net/p/taskcoach/repo'19PASSWORD = file('.passwd', 'rb').readlines()[0].strip()20USERPASSWORD = file('.userpasswd', 'rb').readlines()[0].strip()21# Warning: put release branch first.22BRANCHES = [23    ('Release1_4_Branch', 'LastRelease', 'rel'),24    ('trunk', 'Trunk', 'trunk'),25    ]26####### BUILDSLAVES27from buildbot.buildslave import BuildSlave28from buildbot.steps.trigger import Trigger29from buildbot.schedulers.forcesched import ForceScheduler30c['slaves'] = [BuildSlave("WinXPSP3", PASSWORD, max_builds=1),31               BuildSlave("Ubuntu10", PASSWORD, max_builds=1),32               BuildSlave("Fedora14", PASSWORD, max_builds=1),33               BuildSlave("OpenSuse", PASSWORD, max_builds=1),34               BuildSlave("MacOS", PASSWORD, max_builds=1),35               BuildSlave("Release", PASSWORD, max_builds=1)]36c['slavePortnum'] = 998937####### CHANGESOURCES38# SourceForge does not (yet) provide a buildbot notification39# post-commit hook. There is a feature request for this though40# (https://sourceforge.net/tracker/?func=detail&aid=1633682&group_id=1&atid=350001)41#from buildbot.changes.pb import PBChangeSource42#c['change_source'] = PBChangeSource()43from buildbot.changes.hgpoller import HgPoller44c['change_source'] = []45####### SCHEDULERS46from buildbot.scheduler import Triggerable47from buildbot.schedulers.basic import SingleBranchScheduler48c['schedulers'] = []49forceBuilders = ['Release']50for branchName, longName, shortName in BRANCHES:51    branch = None if branchName == 'trunk' else branchName52    for platform in ['Win32', 'Ubuntu10', 'Fedora14', 'OpenSuse', 'MacOS']:53        c['schedulers'].append(SingleBranchScheduler(name='%s%s' % (longName, platform),54                                                     branch=branch,55                                                     treeStableTimer=0,56                                                     builderNames=['%s-%s' % (platform.lower(), shortName)]))57        forceBuilders.append('%s-%s' % (platform.lower(), shortName))58# Release schedulers59c['schedulers'].append(Triggerable(name="Release",60                                   builderNames=['macos-release', 'windows-release', 'ubuntu10-release', 'fedora14-release', 'opensuse-release']))61c['schedulers'].append(Triggerable(name="PPARelease",62                                   builderNames=['ubuntu10-pparelease']))63# Force schedulers64c['schedulers'].append(ForceScheduler(name="Force", builderNames=forceBuilders))65####### BUILDERS66import os, sys67sys.path.insert(0, os.getcwd())68import tcbuild69reload(tcbuild)70from buildbot.process import factory71from buildbot.steps.source import Mercurial72from buildbot.steps.shell import Compile, SetPropertyFromCommand73c['builders'] = []74# For  each  branch,  all  platforms  should at  least  make  cleanup,75# revision, integration, the  platform-specific package or the generic76# package used  on this platform, and distribution  tests.  Unit tests77# are skipped for some  platforms (MacOS) due to unknown circumstances78# making them crash randomly.79# Each generic  package format may  be used by several  platforms, but80# only one  build is uploaded to  the master: the Fedora  14 build for81# RPM and SRPM and the Ubuntu 10 build for DEB.82# Coverage tests  must only be run  on different OSes (no  need to run83# them  on Fedora if  they are  run on  Ubuntu), so  they run  only on84# Ubuntu  10  and Win32  (not  MacOS since  the  unit  tests can't  be85# launched from the slave there).86# Language tests, documentation generation and source (tar.gz and zip)87# need only be run on one platform; this would be Ubuntu 10.88def addCommonStartSteps(f, skipUnitTests=False, skipIntegrationTests=False, **kwargs):89    f.addStep(tcbuild.Revert(**kwargs))90    f.addStep(tcbuild.Cleanup(**kwargs))91    f.addStep(SetPropertyFromCommand(command='hg identify -n', property='got_revision_number'))92    f.addStep(tcbuild.Revision(**kwargs))93    if not skipUnitTests:94        f.addStep(tcbuild.UnitTests(**kwargs))95    if not skipIntegrationTests:96        f.addStep(tcbuild.IntegrationTests(**kwargs))97def addCommonEndSteps(f, **kwargs):98    f.addStep(tcbuild.DistributionTests(**kwargs))99# Main release builder100f = factory.BuildFactory()101f.addStep(tcbuild.CleanupReleaseStep())102f.addStep(Trigger(schedulerNames=['Release'], waitForFinish=True, set_properties=dict(release=True)))103f.addStep(tcbuild.ZipReleaseStep())104c['builders'].append(dict(name='Release', slavename='Release',105                          builddir='release', factory=f))106for branchName, longName, shortName in BRANCHES:107    hgargs = dict(repourl=REPOURL, branchType='inrepo')108    workdir = 'build/taskcoach'109    branch = 'default' if branchName == 'trunk' else branchName110    source = HgPoller(REPOURL,111                      pollinterval=10*60,112                      workdir='hgpoller-%s' % branch,113                      branch=branch)114    source.setName('poller-%s' % branch)115    c['change_source'].append(source)116    # Win32117    f = factory.BuildFactory()118    f.addStep(Mercurial(**hgargs))119    addCommonStartSteps(f, workdir=workdir, skipUnitTests=True)120    f.addStep(tcbuild.BuildSourceZip(workdir=workdir))121    f.addStep(tcbuild.UploadSourceZip(workdir=workdir))122    f.addStep(tcbuild.BuildEXE(workdir=workdir))123    f.addStep(tcbuild.UploadEXE(workdir=workdir))124    f.addStep(tcbuild.BuildWinPenPack(workdir=workdir))125    f.addStep(tcbuild.UploadWinPenPack(workdir=workdir))126    f.addStep(tcbuild.BuildPortableApps(workdir=workdir))127    f.addStep(tcbuild.UploadPortableApps(workdir=workdir))128    addCommonEndSteps(f, workdir=workdir)129    f.addStep(tcbuild.KillEXE(workdir=workdir))130    c['builders'].append(dict(name='win32-%s' % shortName,131                              slavename='WinXPSP3',132                              builddir='%s-win32' % shortName,133                              factory=f))134    # Ubuntu 10135    f = factory.BuildFactory()136    f.addStep(Mercurial(**hgargs))137    addCommonStartSteps(f, workdir=workdir)138    if shortName == 'rel':139        f.addStep(tcbuild.LanguageTests(workdir=workdir))140    f.addStep(tcbuild.Epydoc(workdir=workdir))141    f.addStep(tcbuild.UploadDoc(workdir=workdir))142    f.addStep(tcbuild.Cleanup(workdir=workdir))143    f.addStep(tcbuild.Revision(workdir=workdir))144    f.addStep(tcbuild.BuildSourceTar(workdir=workdir))145    f.addStep(tcbuild.UploadSourceTar(workdir=workdir))146    f.addStep(tcbuild.BuildSourceRaw(workdir=workdir))147    f.addStep(tcbuild.UploadSourceRaw(workdir=workdir))148    f.addStep(tcbuild.BuildDEB(workdir=workdir))149    f.addStep(tcbuild.UploadDEB(workdir=workdir))150    f.addStep(tcbuild.UploadChangelog(workdir=workdir))151    if shortName == 'rel':152        f.addStep(tcbuild.PPA(name='rel', workdir=workdir))153    elif branchName == 'trunk':154        f.addStep(tcbuild.PPA(name='relnext', workdir=workdir))155    f.addStep(tcbuild.PylintStep(workdir=workdir))156    f.addStep(tcbuild.PylintUploadStep(workdir=workdir))157    f.addStep(tcbuild.Coverage(workdir=workdir))158    f.addStep(tcbuild.UploadCoverage(workdir=workdir))159    addCommonEndSteps(f, workdir=workdir)160    c['builders'].append(dict(name='ubuntu10-%s' % shortName,161                              slavename='Ubuntu10',162                              builddir='%s-ubuntu10' % shortName,163                              factory=f))164    # Fedora 14165    f = factory.BuildFactory()166    f.addStep(Mercurial(**hgargs))167    addCommonStartSteps(f, workdir=workdir)168    f.addStep(tcbuild.BuildRPM(workdir=workdir))169    f.addStep(tcbuild.UploadRPM(workdir=workdir))170    f.addStep(tcbuild.Cleanup(workdir=workdir))171    f.addStep(tcbuild.Revision(workdir=workdir))172    f.addStep(tcbuild.BuildSRPM(workdir=workdir))173    f.addStep(tcbuild.UploadSRPM(workdir=workdir))174    f.addStep(tcbuild.Cleanup(workdir=workdir))175    f.addStep(tcbuild.Revision(workdir=workdir))176    f.addStep(tcbuild.BuildFedora14(workdir=workdir))177    f.addStep(tcbuild.UploadFedora14(workdir=workdir))178    addCommonEndSteps(f, workdir=workdir)179    c['builders'].append(dict(name='fedora14-%s' % shortName,180                              slavename='Fedora14',181                              builddir='%s-fedora14' % shortName,182                              factory=f))183    # OpenSuse184    f = factory.BuildFactory()185    f.addStep(Mercurial(**hgargs))186    addCommonStartSteps(f, skipUnitTests=True, skipIntegrationTests=True, workdir=workdir)187    f.addStep(tcbuild.BuildOpenSuse(workdir=workdir))188    f.addStep(tcbuild.UploadOpenSuse(workdir=workdir))189    c['builders'].append(dict(name='opensuse-%s' % shortName,190                              slavename='OpenSuse',191                              builddir='%s-opensuse' % shortName,192                              factory=f))193    # MacOS194    f = factory.BuildFactory()195    f.addStep(Mercurial(**hgargs))196    addCommonStartSteps(f, skipUnitTests=True, skipIntegrationTests=True, workdir=workdir)197    f.addStep(tcbuild.BuildDMG(workdir=workdir))198    f.addStep(tcbuild.UploadDMG(workdir=workdir))199    addCommonEndSteps(f, workdir=workdir)200    c['builders'].append(dict(name='macos-%s' % shortName,201                              slavename='MacOS',202                              builddir='%s-macos' % shortName,203                              factory=f))204####### Release205f = factory.BuildFactory()206f.addStep(Mercurial(repourl=REPOURL, defaultBranch=BRANCHES[0][0], branchType='inrepo'))207f.addStep(tcbuild.Cleanup(workdir='build/taskcoach'))208f.addStep(tcbuild.BuildDMG(workdir='build/taskcoach'))209f.addStep(tcbuild.UploadDMG(workdir='build/taskcoach'))210c['builders'].append(dict(name='macos-release', slavename='MacOS',211                          builddir='release-macos', factory=f))212f = factory.BuildFactory()213f.addStep(Mercurial(repourl=REPOURL, defaultBranch=BRANCHES[0][0], branchType='inrepo'))214f.addStep(tcbuild.Cleanup(workdir='build/taskcoach'))215f.addStep(tcbuild.BuildEXE(workdir='build/taskcoach'))216f.addStep(tcbuild.UploadEXE(workdir='build/taskcoach'))217f.addStep(tcbuild.BuildSourceZip(workdir='build/taskcoach'))218f.addStep(tcbuild.UploadSourceZip(workdir='build/taskcoach'))219f.addStep(tcbuild.BuildWinPenPack(workdir='build/taskcoach'))220f.addStep(tcbuild.UploadWinPenPack(workdir='build/taskcoach'))221f.addStep(tcbuild.BuildPortableApps(workdir='build/taskcoach'))222f.addStep(tcbuild.UploadPortableApps(workdir='build/taskcoach'))223c['builders'].append(dict(name='windows-release', slavename='WinXPSP3',224                          builddir='release-windows', factory=f))225f = factory.BuildFactory()226f.addStep(Mercurial(repourl=REPOURL, defaultBranch=BRANCHES[0][0], branchType='inrepo'))227f.addStep(tcbuild.Cleanup(workdir='build/taskcoach'))228f.addStep(tcbuild.BuildDEB(workdir='build/taskcoach'))229f.addStep(tcbuild.UploadDEB(workdir='build/taskcoach'))230f.addStep(tcbuild.Cleanup(workdir='build/taskcoach'))231f.addStep(tcbuild.BuildSourceTar(workdir='build/taskcoach'))232f.addStep(tcbuild.UploadSourceTar(workdir='build/taskcoach'))233f.addStep(tcbuild.BuildSourceRaw(workdir=workdir))234f.addStep(tcbuild.UploadSourceRaw(workdir='build/taskcoach'))235f.addStep(tcbuild.ReleaseTests(workdir=workdir))236f.addStep(Trigger(schedulerNames=['PPARelease'], waitForFinish=False))237c['builders'].append(dict(name='ubuntu10-release', slavename='Ubuntu10',238                          builddir='release-ubuntu10', factory=f))239f = factory.BuildFactory()240f.addStep(Mercurial(repourl=REPOURL, defaultBranch=BRANCHES[0][0], branchType='inrepo'))241f.addStep(tcbuild.Cleanup(workdir='build/taskcoach'))242f.addStep(tcbuild.BuildRPM(workdir='build/taskcoach'))243f.addStep(tcbuild.UploadRPM(workdir='build/taskcoach'))244f.addStep(tcbuild.Cleanup(workdir='build/taskcoach'))245f.addStep(tcbuild.BuildSRPM(workdir='build/taskcoach'))246f.addStep(tcbuild.UploadSRPM(workdir='build/taskcoach'))247f.addStep(tcbuild.Cleanup(workdir='build/taskcoach'))248f.addStep(tcbuild.BuildFedora14(workdir='build/taskcoach'))249f.addStep(tcbuild.UploadFedora14(workdir='build/taskcoach'))250c['builders'].append(dict(name='fedora14-release', slavename='Fedora14',251                          builddir='release-fedora14', factory=f))252f = factory.BuildFactory()253f.addStep(Mercurial(repourl=REPOURL, defaultBranch=BRANCHES[0][0], branchType='inrepo'))254f.addStep(tcbuild.Cleanup(workdir='build/taskcoach'))255f.addStep(tcbuild.BuildOpenSuse(workdir='build/taskcoach'))256f.addStep(tcbuild.UploadOpenSuse(workdir='build/taskcoach'))257c['builders'].append(dict(name='opensuse-release', slavename='OpenSuse',258                          builddir='release-opensuse', factory=f))259f = factory.BuildFactory()260f.addStep(Mercurial(repourl=REPOURL, defaultBranch=BRANCHES[0][0], branchType='inrepo'))261f.addStep(tcbuild.Cleanup(workdir='build/taskcoach'))262f.addStep(tcbuild.PPA(workdir='build/taskcoach', name='release'))263c['builders'].append(dict(name='ubuntu10-pparelease', slavename='Ubuntu10',264                          builddir='ubuntu10-pparelease', factory=f))265####### STATUS TARGETS266c['status'] = []267from buildbot.status import html268from buildbot.status.web.authz import Authz269from buildbot.status.web.auth import BasicAuth270c['status'].append(html.WebStatus(http_port=8010,271                                  authz=Authz(auth=BasicAuth([('fraca7', USERPASSWORD), ('frank', USERPASSWORD), ('aaron', USERPASSWORD)]), forceBuild='auth', cancelPendingBuild='auth')))272from buildbot.status import mail273c['status'].append(mail.MailNotifier(fromaddr="fraca7@free.fr",274                                     sendToInterestedUsers=True,275                                     mode='failing',276                                     relayhost='smtp.free.fr',277                                     lookup=tcbuild.TaskCoachEmailLookup()))278c['status'].append(mail.MailNotifier(fromaddr='fraca7@free.fr',279                                     sendToInterestedUsers=False,280                                     mode='all',281                                     relayhost='smtp.free.fr',282                                     extraRecipients=('fraca7@free.fr', 'frank@niessink.com'),283                                     builders=['Release']))284from buildbot.status.client import PBListener285c['status'].append(PBListener(port=8011, user='taskcoach', passwd=PASSWORD))286from buildbot.process.users import manual287c['user_managers'] = []288c['user_managers'].append(manual.CommandlineUserManager(username="taskcoach",289                                                        passwd=PASSWORD,290                                                        port=9990))291####### PROJECT IDENTITY292c['projectName'] = "TaskCoach"293c['projectURL'] = "http://www.taskcoach.org/"...

Convert_for_NEMO.py

Source:Convert_for_NEMO.py

1from cdo import *2cdo=Cdo()3import shutil4import os5import glob6import sys7# What needs to be done with the raw data?8# 1. Reduce the domain to fit the Baltic/North Sea.9# 2. Change some units.10#    a) humidity: from relative [%] to specific [kg/kg]11#    b) wind: from speed and direction to u and v12#    c) precipitation: from kg/m^2 to kg/m^2/s13def precipitation(yearStart, monthStart, yearEnd, monthEnd, workdir, downdir, finaldir):14    """15    Prepare precipitation for NEMO-Nordic. Both rain and snow.16    Extract area, make 12h values (24fc-12fc), change the unit from kg/m^2 to kg/m^2/s.17    Merge all data for one year.18    """19    for year in list(range(yearStart, yearEnd + 1)):20        print "Working on precipitation, year: " , year21#        for month in list(range(monthStart, monthEnd + 1)):22        for month in list(range(monthStart, 13)):23            print "month: ", month24            if year == yearStart and month < monthStart:25                # Before the start date.26                continue27# 1. Reduce the domain to fit the Baltic/North Sea.28            outfile3= workdir+"UERRA_precip_diff_%04d%02d.grb" % (year, month)29            infile2 = downdir+"RR24-12_UERRA_%04d%02d_fc.grb" % (year, month)30            cdo.selindexbox("200,405,280,470", 31                            input=" -setgridtype,curvilinear "+infile2, 32                            output=outfile3, options = '-f nc')33            if year == yearEnd and month == monthEnd:34                # Done with the last month.35                break36# Merge monthly files to a yearly file.37        outfile4=workdir+"UERRA_precip_diff_%04d.grb" % (year)38        cdo.mergetime(input=workdir+"UERRA_precip_diff_%04d??.grb" % (year), 39                      output=outfile4)40        41# Split up rain and snow and change the units. Copy to final destination.42        cdo.splitname(input=outfile4, output=workdir+"UERRA_precip_")43        outfile =workdir+"rain_y"+str(year)+".nc"44        cdo.setname("RAIN",   input=" -divc,43200 "+workdir+"UERRA_precip_tp.nc", output=outfile)45        shutil.copy(outfile, finaldir+"Precip")46        snowfile=workdir+"snow_y"+str(year)+".nc"47        cdo.setname("SNOW",   input=" -divc,43200 "+workdir+"UERRA_precip_sf.nc", output=snowfile)48        shutil.copy(snowfile, finaldir+"Snow")49# Clean up50        for fl in glob.glob(workdir+"UERRA*.nc"):51            os.remove(fl)52        for fl in glob.glob(workdir+"UERRA*.grb"):53            os.remove(fl)54def param_with_analysis(yearStart, monthStart, yearEnd, monthEnd, workdir, downdir, finaldir):55    """56    Prepare all parameters which are avail for the analysis; T2m, SLP, wind.57    Extract area, merge analysis and forecasts. Change the units for wind.58    From wind speed and direction to u/v components in m/s.59    Merge all data for one year for each parameter.60    """61    for year in list(range(yearStart, yearEnd + 1)):62        print "Working on temperature, SLP and wind, year: " , year63#        for month in list(range(monthStart, monthEnd + 1)):64        for month in list(range(monthStart, 13)):65            print "month: ", month66            sys.stdout.flush()67            if year == yearStart and month < monthStart:68                # Before the start date.69                continue70# 1. Reduce the domain to fit the Baltic/North Sea.71            infile1 =downdir+"UERRA_an_%04d%02d.grb" % (year, month)72            outfile1=workdir+"UERRA_an_%04d%02d.nc" % (year, month)73            cdo.selindexbox("200,405,280,470", 74                            input=" -setgridtype,curvilinear "+infile1, 75                            output=outfile1, options = '-f nc')76            infile2 =downdir+"UERRA_fc_%04d%02d.grb" % (year, month)77            outfile2=workdir+"UERRA_fc_%04d%02d.nc" % (year, month)78# For parameters available at the analysis time, forecasts valid at 0, 6, 12, and 18 are not needed.79            cdo.selindexbox("200,405,280,470", 80                            input=" -setgridtype,curvilinear -selhour,1,2,3,4,5,7,8,9,10,11,13,14,15,16,17,19,20,21,22,23 -selname,wdir,10si,msl,2t "+infile2, 81                            output=outfile2, options = '-f nc')82            if year == yearEnd and month == monthEnd:83                # Done with the last month.84                break85# Merge monthly files to a yearly file.86        print "Merge ", year, "and finalize the preparation."87        sys.stdout.flush()88        outfile3=workdir+"UERRA_analysis_%04d.nc" % (year)89        cdo.mergetime(input=workdir+"UERRA_fc_%04d??.nc" % (year)+" "+workdir+"UERRA_an_%04d??.nc" % (year), 90                      output=outfile3, options = '-O')91# Make sure it is really only one year.92        yearfile=workdir+"UERRA_exact_one_year_%04d.nc" % (year)93        cdo.selyear(year, input=outfile3, output=yearfile, options = '-O')94        95        cdo.splitname(input=yearfile, output=workdir+"UERRA_analysis_%04d_" % (year))96### T2m97# Change the parameter name and copy to final destination.98        infile=workdir+"UERRA_analysis_%04d_2t.nc" % (year)99        tfile =workdir+"tair_y"+str(year)+".nc"100        cdo.setname("TAIR", input=infile, output=tfile)101        shutil.copy(tfile, finaldir+"T2m/")102### MSLP103# Change the parameter name and copy to final destination.104        infile=workdir+"UERRA_analysis_%04d_msl.nc" % (year)105        pfile =workdir+"pres_y"+str(year)+".nc"106        cdo.setname("PRES", input=infile, output=pfile)107        shutil.copy(pfile, finaldir+"MSLP/")108### Wind109# Convertion from speed and direction into u+v components110# Then, copy to final destination.111        infile1=workdir+"UERRA_analysis_%04d_10si.nc" % (year)112        infile2=workdir+"UERRA_analysis_%04d_wdir.nc" % (year)113        cdo.chname("10si,speed", input=infile1, output=workdir+"UERRA_analysis_%04d_speed.nc" % (year))114        wfile  =workdir+"speedy_y"+str(year)+".nc"115        cdo.merge(input=infile2+" "+workdir+"UERRA_analysis_%04d_speed.nc" % (year), output=wfile)116        zzfile  =workdir+"uv_y"+str(year)+".nc"117        cdo.expr('\'U=(-1)*speed*sin(0.01745329252*wdir);V=(-1)*speed*cos(0.01745329252*wdir);\'', 118                 input=wfile, output=zzfile)119        shutil.copy(zzfile, finaldir+"Wind/")120        sys.stdout.flush()121        for fl in glob.glob(workdir+"UERRA*.nc"):122            os.remove(fl)123def radiation(yearStart, monthStart, yearEnd, monthEnd, workdir, downdir, finaldir):124    """125    Prepare long and shortwave radiation.126    Change the unit from J/m2 to W/m2 by dividing with 3600s.127    """128    for year in list(range(yearStart, yearEnd + 1)):129        print "Working on radiation, year: " , year130        for month in list(range(monthStart, 13)):131#        for month in list(range(monthStart, monthEnd + 1)):132            print "month: ", month133            sys.stdout.flush()134            if year == yearStart and month < monthStart:135                # Before the start date.136                continue137            infile2 =downdir+"UERRA_fc_%04d%02d.grb" % (year, month)138            outfile2=workdir+"UERRA_fc_%04d%02d.nc" % (year, month)139            cdo.selindexbox("200,405,280,470", 140                            input=" -setgridtype,curvilinear -selname,ssrd,strd "+infile2, 141                            output=outfile2, options = '-f nc')142            cdo.splithour(input=outfile2, output=workdir+"hour_")143            cdo.sub(input=workdir+"hour_02.nc"+" "+workdir+"hour_01.nc", output=workdir+"hourly_02.nc")144            cdo.sub(input=workdir+"hour_03.nc"+" "+workdir+"hour_02.nc", output=workdir+"hourly_03.nc")145            cdo.sub(input=workdir+"hour_04.nc"+" "+workdir+"hour_03.nc", output=workdir+"hourly_04.nc")146            cdo.sub(input=workdir+"hour_05.nc"+" "+workdir+"hour_04.nc", output=workdir+"hourly_05.nc")147            cdo.sub(input=workdir+"hour_06.nc"+" "+workdir+"hour_05.nc", output=workdir+"hourly_06.nc")148            cdo.sub(input=workdir+"hour_08.nc"+" "+workdir+"hour_07.nc", output=workdir+"hourly_08.nc")149            cdo.sub(input=workdir+"hour_09.nc"+" "+workdir+"hour_08.nc", output=workdir+"hourly_09.nc")150            cdo.sub(input=workdir+"hour_10.nc"+" "+workdir+"hour_09.nc", output=workdir+"hourly_10.nc")151            cdo.sub(input=workdir+"hour_11.nc"+" "+workdir+"hour_10.nc", output=workdir+"hourly_11.nc")152            cdo.sub(input=workdir+"hour_12.nc"+" "+workdir+"hour_11.nc", output=workdir+"hourly_12.nc")153            cdo.sub(input=workdir+"hour_14.nc"+" "+workdir+"hour_13.nc", output=workdir+"hourly_14.nc")154            cdo.sub(input=workdir+"hour_15.nc"+" "+workdir+"hour_14.nc", output=workdir+"hourly_15.nc")155            cdo.sub(input=workdir+"hour_16.nc"+" "+workdir+"hour_15.nc", output=workdir+"hourly_16.nc")156            cdo.sub(input=workdir+"hour_17.nc"+" "+workdir+"hour_16.nc", output=workdir+"hourly_17.nc")157            cdo.sub(input=workdir+"hour_18.nc"+" "+workdir+"hour_17.nc", output=workdir+"hourly_18.nc")158            cdo.sub(input=workdir+"hour_20.nc"+" "+workdir+"hour_19.nc", output=workdir+"hourly_20.nc")159            cdo.sub(input=workdir+"hour_21.nc"+" "+workdir+"hour_20.nc", output=workdir+"hourly_21.nc")160            cdo.sub(input=workdir+"hour_22.nc"+" "+workdir+"hour_21.nc", output=workdir+"hourly_22.nc")161            cdo.sub(input=workdir+"hour_23.nc"+" "+workdir+"hour_22.nc", output=workdir+"hourly_23.nc")162            cdo.sub(input=workdir+"hour_00.nc"+" "+workdir+"hour_23.nc", output=workdir+"hourly_00.nc")163            os.rename(workdir+"hour_01.nc", workdir+"hourly_01.nc")164            os.rename(workdir+"hour_07.nc", workdir+"hourly_07.nc")165            os.rename(workdir+"hour_13.nc", workdir+"hourly_13.nc")166            os.rename(workdir+"hour_19.nc", workdir+"hourly_19.nc")167            outfile2=workdir+"hourly_%04d%02d.nc" % (year, month)168            cdo.mergetime(input=workdir+"hourly_??.nc", output=outfile2)169            if year == yearEnd and month == monthEnd:170                # Done with the last month.171                break172        print ("Almost done... merge and then copy.")173        sys.stdout.flush()174            175        infile=workdir+"hourly_%04d??.nc" % (year)176        allrad=cdo.mergetime(input=infile)177        # Make sure it is really only one year.178        yearfile=workdir+"UERRA_exact_one_year_%04d.nc" % (year)179        cdo.selyear(year, input=allrad, output=yearfile, options = '-O')180        181        solfile =workdir+"solrad_y"+str(year)+".nc"182        lonfile =workdir+"lwdrad_y"+str(year)+".nc"183        cdo.setname("SOLRAD",   input=" -divc,3600 -selname,ssrd "+yearfile, output=solfile)184        cdo.setname("LWRAD_DN", input=" -divc,3600 -selname,strd "+yearfile, output=lonfile)185        shutil.copy(solfile, finaldir+"Radiation/")186        shutil.copy(lonfile, finaldir+"Radiation/")187def humidity(yearStart, monthStart, yearEnd, monthEnd, workdir, downdir, finaldir):188    """189    Prepare specific humidity.190    Change from relative to specific humidity based on the August-Roche-Magnus formula.191    https://en.wikipedia.org/wiki/Clausius-Clapeyron_relation, 2017-08-10192    with e_s(T) saturation vapor pressure [in hPa]193    e_s(T) = 6.1094*exp((17.625*TAIR)/(243.04+TAIR))   !temperature in Celsius194    and vapor pressure [e]195    e = e_s(T) * RH         !RH=0...1196    and specific humidity s197    s = 0.622*e / (p-0.378*e)198    """199    for year in list(range(yearStart, yearEnd + 1)):200        print "Working on humidity, year: " , year201        # T2m and MSLP are needed for computation202        # copy these files from the final destination.203        # Hence, these parameters need to be prepare before!!!204        cpfile=finaldir+"T2m/tair_y%04d.nc" % (year)205        shutil.copy(cpfile, workdir)206        split_file=workdir+"tair_y%04d.nc" % (year)207        outfile=workdir+"tair_y%04d_" % (year)208        cdo.splitmon(input=split_file, output=outfile)209        cpfile=finaldir+"MSLP/pres_y%04d.nc" % (year)210        shutil.copy(cpfile, workdir)211        split_file=workdir+"pres_y%04d.nc" % (year)212        outfile=workdir+"pres_y%04d_" % (year)213        cdo.splitmon(input=split_file, output=outfile)214        for month in list(range(monthStart, 13)):215            print "month: ", month216            if year == yearStart and month < monthStart:217                # Before the start date.218                continue219# 1. Reduce the domain to fit the Baltic/North Sea.220            fc_infile =downdir+"UERRA_fc_%04d%02d.grb" % (year, month)221            outfile2  =workdir+"UERRA_fc_%04d%02d.nc" % (year, month)222            cdo.selindexbox("200,405,280,470", 223                            input=" -setgridtype,curvilinear -selname,r "+fc_infile, 224                            output=outfile2, options = '-f nc')225            cdo.merge(input=workdir+"pres_y%04d_%02d.nc" % (year, month) + " " 226                      +workdir+"tair_y%04d_%02d.nc" % (year, month) + " " + outfile2,227                      output=workdir+"all_param_%04d_%02d.nc" % (year, month), 228                      options = ' -O')229 230            cdo.expr('\'SHUMID=0.622*(6.1094*exp((17.625*(TAIR-273.15))/(243.04+(TAIR-273.15)))*r/100)/(PRES/100-0.377*(6.1094*exp((17.625*(TAIR-273.15))/(243.04+(TAIR-273.15)))*r/100));\'' , 231                     input= workdir+"all_param_%04d_%02d.nc" % (year, month), 232                     output=workdir+"shum_%04d_%02d.nc" % (year, month))233            if year == yearEnd and month == monthEnd:234                # Done with the last month.235                break236# Merge all monthly files into a yearly file and copy to final destination237        cdo.mergetime(input=workdir+"shum_%04d_??.nc" % (year), 238                      output=workdir+"shumid_y%04d.nc" % (year)) ...

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