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How to use windowList method in fMBT

Best Python code snippet using fMBT_python

SamplingAccuracyEvaluation.py

Source:SamplingAccuracyEvaluation.py

1from SamplingAccuracyEvaluation import SamplingAlgorithm as SA2from SamplingAccuracyEvaluation import AccuracyEvaluation as AE3from SamplingAccuracyEvaluation import PrintGraph as PG4from SamplingAccuracyEvaluation import StatisticalCalculation as SC5import operator6def populationListGenerate(filePath, target):7    print('Generate Population List')8    populationList = []9    populationFile = open(filePath, 'r')10    while True:11        line = populationFile.readline()12        if not line: break13        line_data = line.split(',')14        populationList.append(line_data[target])15    populationFile.close()16    return populationList17def calculateScore(evalList):18    score = 019    for i in range(len(evalList)):20        if i == 0:21            score = score + abs(evalList[i])/422        else:23            score = score + abs(evalList[i])/324    return score25def run(windowSize, sampleSize, filePath, target=0):26    print('############## Sampling Accuracy Evaluation ##############')27    count = 128    numOfTrials = 129    jSDPieceCount = 2030    pAAPieceCount = 2031    print('Window Size: ' ,windowSize)32    print('Sample Size: ' ,sampleSize)33    print('JSD Piece Count: ' ,jSDPieceCount)34    print('PAA Piece Count: ' ,pAAPieceCount)35    populationList = populationListGenerate(filePath, target)36    windowList = []37    accuracyMeasureCount = 338    evalDic = {}39    reservoirEvalList = [0.0 for _ in range(accuracyMeasureCount)]40    hashEvalList = [0.0 for _ in range(accuracyMeasureCount)]41    priorityEvalList = [0.0 for _ in range(accuracyMeasureCount)]42    print()43    for data in populationList:44        windowList.append(data)45        if count == windowSize:46            print('################## ' + str(numOfTrials) + ' Evaluation Start ####################')47            # if numOfTrials == 1: PG.printGraph(windowList, 'Population', numOfTrials)48            print()49            print(str(numOfTrials)+'_ReservoirSampling')50            sampleList = SA.sortedReservoirSam(sampleSize, windowList)51            tempEvalList = AE.run(windowList, sampleList, jSDPieceCount, pAAPieceCount)52            SC.sumPerIndex(reservoirEvalList, tempEvalList)53            # if numOfTrials == 1: PG.printGraph(sampleList, 'Reservoir', numOfTrials)54            print()55            print(str(numOfTrials)+'_HashSampling')56            sampleList = SA.hashSam(sampleSize, windowList)57            tempEvalList = AE.run(windowList, sampleList, jSDPieceCount, pAAPieceCount)58            SC.sumPerIndex(hashEvalList, tempEvalList)59            # if numOfTrials == 1: PG.printGraph(sampleList, 'Hash', numOfTrials)60            print()61            print(str(numOfTrials)+'_PrioritySampling')62            sampleList = SA.sortedPrioritySam(sampleSize, windowList)63            tempEvalList = AE.run(windowList, sampleList, jSDPieceCount, pAAPieceCount)64            SC.sumPerIndex(priorityEvalList, tempEvalList)65            # if numOfTrials == 1: PG.printGraph(sampleList, 'Priority', numOfTrials)66            print()67            numOfTrials = numOfTrials + 168            count = 069            windowList = []70        count = count + 171    for i in range(accuracyMeasureCount):72        reservoirEvalList[i] = reservoirEvalList[i] / numOfTrials73        hashEvalList[i] = hashEvalList[i] / numOfTrials74        priorityEvalList[i] = priorityEvalList[i] / numOfTrials75    evalDic['RESERVOIR_SAMPLING'] = calculateScore(reservoirEvalList)76    evalDic['HASH_SAMPLING'] = calculateScore(hashEvalList)77    evalDic['PRIORITY_SAMPLING'] = calculateScore(priorityEvalList)78    sortedEvalList = sorted(evalDic.items(), key = operator.itemgetter(1))...

IDT.py

Source:IDT.py

1from SummaryClass import SummaryClass2import constants, time, Data3def calculateIdtAlgorithm(pointsList):4    start = time.process_time()5    i = 06    idtPointList = []7    for e, element in enumerate(pointsList):8        idtPointList.append(Data.DataIDT(element.Type, element.TimeStamp, element.CoordX, element.CoordY, False, e))9    timeStart = int(idtPointList[0].TimeStamp)10    windowList = []11    coordXList = []12    coordYList = []13    retList = []14    summaryList = []15    countPoints = len(idtPointList)16    countFix = 017    while i < countPoints - 1:18        if idtPointList[i].Type == 'SS':19            i += 120            continue21        currTime = int(idtPointList[i].TimeStamp)22        while currTime - timeStart <= constants.WINDOW_TIME_THRESHOLD:23            windowList.append(idtPointList[i])24            i += 125            if i >= countPoints:26                break27            currTime = int(idtPointList[i].TimeStamp)28        if i >= countPoints:29            break30        if len(windowList) > 1:31            Dispersion = (max(maxX.CoordX for maxX in windowList) - min(minX.CoordX for minX in windowList)) + (max(maxY.CoordY for maxY in windowList) - min(minY.CoordY for minY in windowList))32        while len(windowList) > 1:33            if Dispersion <= constants.DISPERSION_THRESHOLD and len(windowList) > 1:34                while (Dispersion < constants.DISPERSION_THRESHOLD):35                    if idtPointList[i].Type == 'SS':36                        i += 137                        continue38                    windowList.append(idtPointList[i])39                    i += 140                    if i >= countPoints:41                        break42                    Dispersion = (max(maxX.CoordX for maxX in windowList) - min(minX.CoordX for minX in windowList)) + (max(maxY.CoordY for maxY in windowList) - min(minY.CoordY for minY in windowList))43                if i >= countPoints:44                    break45                retList.extend(windowList)46                minWind = min(min.Index for min in windowList)47                maxWind = max(max.Index for max in windowList)48                while minWind < maxWind:49                    idtPointList[minWind].Fixation = True50                    minWind += 151                pointX = sum(sumX.CoordX for sumX in windowList) / len(windowList)52                pointY = sum(sumY.CoordY for sumY in windowList) / len(windowList)53                duration = int(max(maxTime.TimeStamp for maxTime in windowList)) - int(min(minTime.TimeStamp for minTime in windowList))54                summaryList.append(SummaryClass(pointX, pointY, len(windowList), duration))55                countFix += len(windowList)56                coordXList.append(pointX)57                coordYList.append(pointY)58                windowList = []59            else:60                windowList.pop(0)61        if i <= countPoints - 1:62            timeStart = int(pointsList[i].TimeStamp)63    end = time.process_time()...

client.py

Source:client.py

1from socket import timeout2import socket3import sys4import time5from check import ip_checksum6import random7import select8import Queue9s = socket.socket(socket.AF_INET, socket.SOCK_DGRAM)10inputs = [s]11outputs= [s]12timeout = 113host='localhost'14port =4021315seq = 016numPackets = 1017windowSize = 318windowList = []19msgList = []20s.setblocking(0)21s.settimeout(1)22	for i in range(numPackets):23		msgList.append('Message #' + str(i))24#fill the queue initially before the algorithm can take over25	for i in range(min(numPackets,windowSize)):26		windowList.append(msgList.pop(0))27	while len(msgList) != 0 or len(windowList) != 0:28	for i in range(min(numPackets,windowSize - len(windowList))):29		windowList.insert(0,msgList.pop(0))30		lastnum =031	while lastnum != (len(windowList) - 1):32		for i in range(len(windowList)):33			checksum = ip_checksum(windowList[i])34			msg = str(i) + ' ' + windowList[i]+ ' ' + checksum35			print msg36			s.sendto(msg,(host,port))37		 try:38			d = s.recvfrom(1024)39			print d, ' ' , d[0][0]40			lastnum+=141		except socket.timeout:42			print ''43	if lastnum == (len(windowList) -1:44		windowList.clear()45				     '''46				     for i in range(10):47				     msg= 'Message #'+str(i)48				     checksum = ip_checksum(msg)49				     error = random.random()50#if error>0.75:51#	checksum=checksum+str(1)52				     s.sendto(str(seq)+' '+msg + '' + checksum ,(host,port))53				     print 'Sent: ', str(seq),' ', msg , '' , checksum54				     try:55				     d = s.recvfrom(1024)56				     print d[0]57				     if d[0].startswith('ACK'):58				     seq= 1 - seq		59				     except timeout:60				     print 'Timeout'61# new code62		     for lastnum in range(0,len(windowList)):63			     if len(windowList) == 064	break65	     time.sleep(2)66	print lastnum, windowList67	       checksum = ip_checksum(windowList[i])68	       msg = str(i) + ' ' + windowList[i]+ ' ' + checksum69	print msg70	       s.sendto(msg,(host,port))71	       try:72		       d = s.recvfrom(1024)73		       print d, ' ' , d[0][0]74		       del windowList[int(d[0][0])]75		       lastnum	76		       except socket.timeout:77		       print ''78		       lastnum+=1...

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