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How to use create_group method in localstack
Best Python code snippet using localstack_python
db_access.py
Source:db_access.py 
...13class FlyDB(dict):14 def __init__(self,root_dir):15 dict.__init__(self)16 self.root_dir = root_dir17 def create_group(self,flynum):18 self[flynum] = h5py.File(self.root_dir+'Fly%04d'%(int(flynum))+'/fly_record.hdf5','w')19 def close(self):20 for key in self.keys():21 self[key].close()22 print self[key]23 def flush(self):24 for key in self.keys():25 self[key].flush()26def main():27 import cPickle28 fn = 'fly_db_init.cpkl'29 f = open(fn,'wb')30 cPickle.dump(fly_db,f)31 f.close()32def get_db():33 #fly_db = h5py.File('/Volumes/FlyDataB/FlyDB/flydb.hdf5','a')34 flydirs = filter(lambda s:'Fly' in s,os.listdir(root_dir))35 initialized_flies = filter(lambda s:'fly_record.hdf5' in os.listdir(root_dir+'/'+s),flydirs)36 fly_db = FlyDB(root_dir)37 for fly in initialized_flies:38 flynum = int(fly.split('Fly')[1])39 #print flynum40 fly_db[flynum] = h5py.File(root_dir+fly+'/fly_record.hdf5','a')41 return fly_db42starfield_pattern_names_6_0_2014 = ['equator_000.mat',43 'equator_030.mat',44 'equator_060.mat',45 'equator_090.mat',46 'equator_120.mat',47 'equator_150.mat',48 'equator_180.mat',49 'equator_210.mat',50 'equator_240.mat',51 'equator_270.mat',52 'equator_300.mat',53 'equator_330.mat',54 'coromeridian_030.mat',55 'coromeridian_060.mat',56 'coromeridian_090.mat',57 'coromeridian_120.mat',58 'coromeridian_150.mat',59 'coromeridian_210.mat',60 'coromeridian_240.mat',61 'coromeridian_270.mat',62 'coromeridian_300.mat',63 'coromeridian_330.mat',64 'sagimeridian_030.mat',65 'sagimeridian_060.mat',66 'sagimeridian_120.mat',67 'sagimeridian_150.mat',68 'sagimeridian_210.mat',69 'sagimeridian_240.mat',70 'sagimeridian_300.mat',71 'sagimeridian_330.mat']72starfield_pattern_names_6_29_2014 = ['translate_forward.mat',73 'translate_backward.mat',74 'translate_up.mat',75 'translate_down.mat',76 'spin_equator_000.mat',77 'spin_equator_030.mat',78 'spin_equator_060.mat',79 'spin_equator_090.mat',80 'spin_equator_120.mat',81 'spin_equator_150.mat',82 'spin_equator_180.mat',83 'spin_equator_210.mat',84 'spin_equator_240.mat',85 'spin_equator_270.mat',86 'spin_equator_300.mat',87 'spin_equator_330.mat']88l = [[x,x,x] for x in starfield_pattern_names_6_29_2014]89starfield_pattern_names_6_29_2014 = [item for sublist in l for item in sublist]90class FlySwitch(dict):91 def __getitem__(self,flynum):92 return self.__getattribute__('initfly_'+str(flynum))(flynum)93class InitDB(FlySwitch):94 #fly_db = h5py.File("/Volumes/FlyDataB/FlyDB/flydb.hdf5", "w")95 def __init__(self):96 self.fly_db = FlyDB(root_dir)97 def init_all(self):98 import inspect99 initfuncts = filter(lambda t:'initfly' in t[0],inspect.getmembers(self))100 flynums = [int(x[0].split('initfly_')[1]) for x in initfuncts]101 #############################################################################################fly_record = dict()102 def initfly_111(self,flynum):103 fly_db = self.fly_db104 fly_db.create_group(flynum)105 fly_record =fly_db[flynum]106 fly_record['flynum'] = flynum107 fly_record.create_group('experiments')108 fly_record['experiments'].create_group('lr_blob_expansion')109 fly_record['experiments']['lr_blob_expansion']['photron_seq_nums'] = [1,2,3,4,5,6]110 fly_record['experiments']['lr_blob_expansion']['axon_file_names'] = ['fly01_lr_blob_expansion_14401000.abf']111 fly_record['experiments']['lr_blob_expansion']['photron_date_string'] = ['20140401']112 fly_record['experiments']['lr_blob_expansion']['kine_filename'] = ['WBkin.mat']113 fly_record['experiments']['lr_blob_expansion']['solution_format_string'] = ['20140401_S%04d/']114 fly_record['experiments']['lr_blob_expansion']['photron_frame_rate_Hz'] = 6000115 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_volts'] = np.linspace(1,10,12)116 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_vals'] = np.concatenate(([np.nan],np.arange(0,12)*30))117 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_ID'] = 'b1'118 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_side'] = 'l'119 fly_record['experiments']['lr_blob_expansion'].create_group('sequences')120 #############################################################################################121 def initfly_112(self,flynum):122 fly_db = self.fly_db123 fly_db.create_group(flynum)124 fly_record =fly_db[flynum]125 fly_record['flynum'] = flynum126 fly_record.create_group('experiments')127 fly_record['experiments'].create_group('lr_blob_expansion')128 fly_record['experiments']['lr_blob_expansion']['photron_seq_nums'] = [7,8,9,10,11,12]129 fly_record['experiments']['lr_blob_expansion']['axon_file_names'] = ['fly02_lr_blob_expansion_14401002.abf']130 fly_record['experiments']['lr_blob_expansion']['photron_date_string'] = ['20140401']131 fly_record['experiments']['lr_blob_expansion']['kine_filename'] = ['WBkin.mat']132 fly_record['experiments']['lr_blob_expansion']['solution_format_string'] = ['20140401_S%04d/']133 fly_record['experiments']['lr_blob_expansion']['photron_frame_rate_Hz'] = 6000134 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_volts'] = np.linspace(1,10,12)135 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_vals'] = np.concatenate(([np.nan],np.arange(0,12)*30))136 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_ID'] = 'b1'137 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_side'] = 'l'138 fly_record['experiments']['lr_blob_expansion'].create_group('sequences')139 #############################################################################################140 def initfly_114(self,flynum):141 fly_db = self.fly_db142 fly_db.create_group(flynum)143 fly_record =fly_db[flynum]144 fly_record['flynum'] = flynum145 fly_record.create_group('experiments')146 fly_record['experiments'].create_group('lr_blob_expansion')147 fly_record['experiments']['lr_blob_expansion']['photron_seq_nums'] = [13,14,15,16,17,18]148 fly_record['experiments']['lr_blob_expansion']['axon_file_names'] = ['fly04_lr_blob_expansion_14401012.abf']149 fly_record['experiments']['lr_blob_expansion']['photron_date_string'] = ['20140401']150 fly_record['experiments']['lr_blob_expansion']['kine_filename'] = ['WBkin.mat']151 fly_record['experiments']['lr_blob_expansion']['solution_format_string'] = ['20140401_S%04d/']152 fly_record['experiments']['lr_blob_expansion']['photron_frame_rate_Hz'] = 6000153 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_volts'] = np.linspace(1,10,12)154 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_vals'] = np.concatenate(([np.nan],np.arange(0,12)*30))155 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_ID'] = 'b1'156 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_side'] = 'l'157 fly_record['experiments']['lr_blob_expansion'].create_group('sequences')158 #############################################################################################159 def initfly_115(self,flynum):160 fly_db = self.fly_db161 fly_db.create_group(flynum)162 fly_record =fly_db[flynum]163 fly_record['flynum'] = flynum164 fly_record.create_group('experiments')165 fly_record['experiments'].create_group('lr_blob_expansion')166 fly_record['experiments']['lr_blob_expansion']['photron_seq_nums'] = [1,2,3,4,5,6]167 fly_record['experiments']['lr_blob_expansion']['axon_file_names'] = ['fly01_lr_blob_expansion_14402001.abf']168 fly_record['experiments']['lr_blob_expansion']['photron_date_string'] = ['20140402']169 fly_record['experiments']['lr_blob_expansion']['kine_filename'] = ['WBkin.mat']170 fly_record['experiments']['lr_blob_expansion']['solution_format_string'] = ['20140402_S%04d/']171 fly_record['experiments']['lr_blob_expansion']['photron_frame_rate_Hz'] = 6000172 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_volts'] = np.linspace(1,10,12)173 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_vals'] = np.concatenate(([np.nan],np.arange(0,12)*30))174 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_ID'] = 'b1'175 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_side'] = 'l'176 fly_record['experiments']['lr_blob_expansion'].create_group('sequences')177 #############################################################################################178 def initfly_116(self,flynum):179 fly_db = self.fly_db180 fly_db.create_group(flynum)181 fly_record =fly_db[flynum]182 fly_record['flynum'] = flynum183 fly_record.create_group('experiments')184 fly_record['experiments'].create_group('lr_blob_expansion')185 fly_record['experiments']['lr_blob_expansion']['photron_seq_nums'] = [1,2,3,4,5,6]186 fly_record['experiments']['lr_blob_expansion']['axon_file_names'] = ['fly01_lr_blob_expansion_14410000.abf']187 fly_record['experiments']['lr_blob_expansion']['photron_date_string'] = ['20140410']188 fly_record['experiments']['lr_blob_expansion']['kine_filename'] = ['WBkin.mat']189 fly_record['experiments']['lr_blob_expansion']['solution_format_string'] = ['20140410_S%04d/']190 fly_record['experiments']['lr_blob_expansion']['photron_frame_rate_Hz'] = 6000191 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_volts'] = np.linspace(1,10,12)192 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_vals'] = np.concatenate(([np.nan],np.arange(0,12)*30))193 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_ID'] = 'b1'194 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_side'] = 'l'195 fly_record['experiments']['lr_blob_expansion'].create_group('sequences')196 #############################################################################################197 def initfly_117(self,flynum):198 fly_db = self.fly_db199 fly_db.create_group(flynum)200 fly_record =fly_db[flynum]201 fly_record['flynum'] = flynum202 fly_record.create_group('experiments')203 fly_record['experiments'].create_group('lr_blob_expansion')204 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')205 fly_record['experiments']['lr_blob_expansion']['photron_seq_nums'] = [7,8,9,10,11,12]206 fly_record['experiments']['lr_blob_expansion']['axon_file_names'] = ['fly02_lr_blob_expansion_14410002.abf']207 fly_record['experiments']['lr_blob_expansion']['photron_date_string'] = ['20140410']208 fly_record['experiments']['lr_blob_expansion']['kine_filename'] = ['WBkin.mat']209 fly_record['experiments']['lr_blob_expansion']['solution_format_string'] = ['20140410_S%04d/']210 fly_record['experiments']['lr_blob_expansion']['photron_frame_rate_Hz'] = 6000211 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_volts'] = np.linspace(1,10,12)212 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_vals'] = np.concatenate(([np.nan],np.arange(0,12)*30))213 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_ID'] = 'b1'214 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_side'] = 'l'215 fly_record['experiments']['lr_blob_expansion'].create_group('sequences')216 #############################################################################################217 def initfly_118(self,flynum):218 fly_db = self.fly_db219 fly_db.create_group(flynum)220 fly_record =fly_db[flynum]221 fly_record['flynum'] = flynum222 fly_record.create_group('experiments')223 fly_record['experiments'].create_group('lr_blob_expansion')224 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')225 fly_record['experiments']['lr_blob_expansion']['photron_seq_nums'] = [13,14,15,16,17]226 fly_record['experiments']['lr_blob_expansion']['axon_file_names'] = ['fly03_lr_blob_expansion_14410003.abf']227 fly_record['experiments']['lr_blob_expansion']['photron_date_string'] = ['20140410']228 fly_record['experiments']['lr_blob_expansion']['kine_filename'] = ['WBkin.mat']229 fly_record['experiments']['lr_blob_expansion']['solution_format_string'] = ['20140410_S%04d/']230 fly_record['experiments']['lr_blob_expansion']['photron_frame_rate_Hz'] = 6000231 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_volts'] = np.linspace(1,10,12)232 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_vals'] = np.concatenate(([np.nan],np.arange(0,12)*30))233 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_ID'] = 'b1'234 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_side'] = 'l'235 fly_record['experiments']['lr_blob_expansion'].create_group('sequences')236 #############################################################################################237 def initfly_122(self,flynum):238 fly_db = self.fly_db239 fly_db.create_group(flynum)240 fly_record =fly_db[flynum]241 fly_record['flynum'] = flynum242 fly_record.create_group('experiments')243 fly_record['experiments'].create_group('lr_blob_expansion')244 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')245 fly_record['experiments']['lr_blob_expansion']['photron_seq_nums'] = [1,2,3,4,5,6]246 fly_record['experiments']['lr_blob_expansion']['axon_file_names'] = ['fly01_lr_blob_expansion_14428000.abf']247 fly_record['experiments']['lr_blob_expansion']['photron_date_string'] = ['20140428']248 fly_record['experiments']['lr_blob_expansion']['kine_filename'] = ['WBkin.mat']249 fly_record['experiments']['lr_blob_expansion']['solution_format_string'] = ['20140428_S%04d/']250 fly_record['experiments']['lr_blob_expansion']['photron_frame_rate_Hz'] = 6000251 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_volts'] = np.linspace(1,10,12)252 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_vals'] = np.concatenate(([np.nan],np.arange(0,12)*30))253 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_ID'] = 'b1'254 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_side'] = 'r'255 fly_record['experiments']['lr_blob_expansion'].create_group('sequences')256 #############################################################################################257 def initfly_123(self,flynum):258 fly_db = self.fly_db259 fly_db.create_group(flynum)260 fly_record =fly_db[flynum]261 fly_record['flynum'] = flynum262 fly_record.create_group('experiments')263 fly_record['experiments'].create_group('lr_blob_expansion')264 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')265 fly_record['experiments']['lr_blob_expansion']['photron_seq_nums'] = [7,8,9,10,11]266 fly_record['experiments']['lr_blob_expansion']['axon_file_names'] = ['fly02_lr_blob_expansion_14428001.abf']267 fly_record['experiments']['lr_blob_expansion']['photron_date_string'] = ['20140428']268 fly_record['experiments']['lr_blob_expansion']['kine_filename'] = ['WBkin.mat']269 fly_record['experiments']['lr_blob_expansion']['solution_format_string'] = ['20140428_S%04d/']270 fly_record['experiments']['lr_blob_expansion']['photron_frame_rate_Hz'] = 6000271 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_volts'] = np.linspace(1,10,12)272 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_vals'] = np.concatenate(([np.nan],np.arange(0,12)*30))273 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_ID'] = 'b1'274 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_side'] = 'r'275 fly_record['experiments']['lr_blob_expansion'].create_group('sequences')276 #############################################################################################277 def initfly_124(self,flynum):278 fly_db = self.fly_db279 fly_db.create_group(flynum)280 fly_record =fly_db[flynum]281 fly_record['flynum'] = flynum282 fly_record.create_group('experiments')283 fly_record['experiments'].create_group('lr_blob_expansion')284 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')285 fly_record['experiments']['lr_blob_expansion']['photron_seq_nums'] = [2,3,4,5,6]286 fly_record['experiments']['lr_blob_expansion']['axon_file_names'] = ['fly01_lr_blob_expansion_14429001.abf']287 fly_record['experiments']['lr_blob_expansion']['photron_date_string'] = ['20140429']288 fly_record['experiments']['lr_blob_expansion']['kine_filename'] = ['WBkin.mat']289 fly_record['experiments']['lr_blob_expansion']['solution_format_string'] = ['20140429_S%04d/']290 fly_record['experiments']['lr_blob_expansion']['photron_frame_rate_Hz'] = 6000291 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_volts'] = np.linspace(1,10,12)292 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_vals'] = np.concatenate(([np.nan],np.arange(0,12)*30))293 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_ID'] = 'b1'294 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_side'] = 'r'295 fly_record['experiments']['lr_blob_expansion'].create_group('sequences')296 #############################################################################################297 def initfly_125(self,flynum):298 fly_db = self.fly_db299 fly_db.create_group(flynum)300 fly_record =fly_db[flynum]301 fly_record['flynum'] = flynum302 fly_record.create_group('experiments')303 fly_record['experiments'].create_group('lr_blob_expansion')304 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')305 fly_record['experiments']['lr_blob_expansion']['photron_seq_nums'] = [7,8,9,10,11,12]306 fly_record['experiments']['lr_blob_expansion']['axon_file_names'] = ['fly02_lr_blob_expansion_14429004.abf']307 fly_record['experiments']['lr_blob_expansion']['photron_date_string'] = ['20140429']308 fly_record['experiments']['lr_blob_expansion']['kine_filename'] = ['WBkin.mat']309 fly_record['experiments']['lr_blob_expansion']['solution_format_string'] = ['20140429_S%04d/']310 fly_record['experiments']['lr_blob_expansion']['photron_frame_rate_Hz'] = 6000311 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_volts'] = np.linspace(1,10,12)312 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_vals'] = np.concatenate(([np.nan],np.arange(0,12)*30))313 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_ID'] = 'b1'314 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_side'] = 'r'315 fly_record['experiments']['lr_blob_expansion'].create_group('sequences')316 def initfly_130(self,flynum):317 fly_db = self.fly_db318 fly_db.create_group(flynum)319 fly_record =fly_db[flynum]320 fly_record['flynum'] = flynum321 fly_record.create_group('experiments')322 fly_record['experiments'].create_group('lr_blob_expansion')323 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')324 fly_record['experiments']['lr_blob_expansion']['photron_seq_nums'] = [1,2,3,4,5,6]325 fly_record['experiments']['lr_blob_expansion']['axon_file_names'] = ['fly01_lr_blob_expansion_14506005.abf']326 fly_record['experiments']['lr_blob_expansion']['photron_date_string'] = ['20140506']327 fly_record['experiments']['lr_blob_expansion']['kine_filename'] = ['WBkin.mat']328 fly_record['experiments']['lr_blob_expansion']['solution_format_string'] = ['20140506_S%04d/']329 fly_record['experiments']['lr_blob_expansion']['photron_frame_rate_Hz'] = 6000330 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_volts'] = np.linspace(1,10,12)331 fly_record['experiments']['lr_blob_expansion']['Ypos_trial_vals'] = np.concatenate(([np.nan],np.arange(0,12)*30))332 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_ID'] = 'i1'333 fly_record['experiments']['lr_blob_expansion']['AMsysCh1_side'] = 'r'334 fly_record['experiments']['lr_blob_expansion'].create_group('sequences')335 def initfly_151(self,flynum):336 fly_db = self.fly_db337 fly_db.create_group(flynum)338 fly_record =fly_db[flynum]339 fly_record['flynum'] = flynum340 fly_record.create_group('experiments')341 fly_record['experiments'].create_group('img_starfield_t2_rep1')342 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')343 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0151_rotating_starfield_imaging_T2_trial_1_14529002.abf']344 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/trial1/trial1_MMStack.ome.tif']345 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014346 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70347 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5348 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')349 def initfly_153(self,flynum):350 fly_db = self.fly_db351 fly_db.create_group(flynum)352 fly_record =fly_db[flynum]353 fly_record['flynum'] = flynum354 fly_record.create_group('experiments')355 fly_record['experiments'].create_group('img_starfield_t2_rep1')356 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')357 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0153_rotating_starfield_imaging_T2_trial_1_14530005.abf']358 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']359 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014360 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70361 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5362 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')363 def initfly_154(self,flynum):364 fly_db = self.fly_db365 fly_db.create_group(flynum)366 fly_record =fly_db[flynum]367 fly_record['flynum'] = flynum368 fly_record.create_group('experiments')369 fly_record['experiments'].create_group('img_starfield_t2_rep1')370 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')371 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0154_rotating_starfield_imaging_T2_trial_1_14530007.abf']372 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']373 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014374 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70375 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5376 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')377 def initfly_155(self,flynum):378 fly_db = self.fly_db379 fly_db.create_group(flynum)380 fly_record =fly_db[flynum]381 fly_record['flynum'] = flynum382 fly_record.create_group('experiments')383 fly_record['experiments'].create_group('img_starfield_t2_rep1')384 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')385 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0155_rotating_starfield_imaging_T2_trial_1_14530009.abf']386 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']387 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014388 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70389 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5390 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')391 def initfly_156(self,flynum):392 fly_db = self.fly_db393 fly_db.create_group(flynum)394 fly_record =fly_db[flynum]395 fly_record['flynum'] = flynum396 fly_record.create_group('experiments')397 fly_record['experiments'].create_group('img_starfield_t2_rep1')398 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')399 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0156_rotating_starfield_imaging_T2_trial_1_14530011.abf']400 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']401 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014402 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70403 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5404 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')405 def initfly_157(self,flynum):406 fly_db = self.fly_db407 fly_db.create_group(flynum)408 fly_record =fly_db[flynum]409 fly_record['flynum'] = flynum410 fly_record.create_group('experiments')411 fly_record['experiments'].create_group('img_starfield_t2_rep1')412 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')413 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0157_rotating_starfield_imaging_T2_trial_1_14602000.abf']414 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']415 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014416 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70417 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5418 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')419 def initfly_158(self,flynum):420 fly_db = self.fly_db421 fly_db.create_group(flynum)422 fly_record =fly_db[flynum]423 fly_record['flynum'] = flynum424 fly_record.create_group('experiments')425 fly_record['experiments'].create_group('img_starfield_t2_rep1')426 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')427 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0158_rotating_starfield_imaging_T2_trial_1_14602002.abf']428 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']429 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014430 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70431 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5432 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')433 def initfly_159(self,flynum):434 fly_db = self.fly_db435 fly_db.create_group(flynum)436 fly_record =fly_db[flynum]437 fly_record['flynum'] = flynum438 fly_record.create_group('experiments')439 fly_record['experiments'].create_group('img_starfield_t2_rep1')440 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')441 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0159_rotating_starfield_imaging_T2_trial_1_14602004.abf']442 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']443 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014444 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70445 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5446 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')447 def initfly_160(self,flynum):448 fly_db = self.fly_db449 fly_db.create_group(flynum)450 fly_record =fly_db[flynum]451 fly_record['flynum'] = flynum452 fly_record.create_group('experiments')453 fly_record['experiments'].create_group('img_starfield_t2_rep1')454 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')455 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0160_rotating_starfield_imaging_T2_trial_1_14602007.abf']456 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']457 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014458 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70459 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5460 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')461 def initfly_161(self,flynum):462 fly_db = self.fly_db463 fly_db.create_group(flynum)464 fly_record =fly_db[flynum]465 fly_record['flynum'] = flynum466 fly_record.create_group('experiments')467 fly_record['experiments'].create_group('img_starfield_t2_rep1')468 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')469 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0161_rotating_starfield_imaging_T2_trial_1_14603000.abf']470 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']471 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014472 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70473 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5474 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')475 def initfly_162(self,flynum):476 fly_db = self.fly_db477 fly_db.create_group(flynum)478 fly_record =fly_db[flynum]479 fly_record['flynum'] = flynum480 fly_record.create_group('experiments')481 fly_record['experiments'].create_group('img_starfield_t2_rep1')482 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')483 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0162_rotating_starfield_imaging_T2_trial_1_14603003.abf']484 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']485 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014486 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70487 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5488 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')489 def initfly_163(self,flynum):490 fly_db = self.fly_db491 fly_db.create_group(flynum)492 fly_record =fly_db[flynum]493 fly_record['flynum'] = flynum494 fly_record.create_group('experiments')495 fly_record['experiments'].create_group('img_starfield_t2_rep1')496 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')497 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0163_rotating_starfield_imaging_T2_trial_1_14603009.abf']498 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']499 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014500 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70501 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5502 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')503 def initfly_164(self,flynum):504 fly_db = self.fly_db505 fly_db.create_group(flynum)506 fly_record =fly_db[flynum]507 fly_record['flynum'] = flynum508 fly_record.create_group('experiments')509 fly_record['experiments'].create_group('img_starfield_t2_rep1')510 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')511 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0164_rotating_starfield_imaging_T2_trial_1_14603012.abf']512 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']513 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014514 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70515 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5516 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')517 def initfly_165(self,flynum):518 fly_db = self.fly_db519 fly_db.create_group(flynum)520 fly_record =fly_db[flynum]521 fly_record['flynum'] = flynum522 fly_record.create_group('experiments')523 fly_record['experiments'].create_group('img_starfield_t2_rep1')524 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')525 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0165_rotating_starfield_imaging_T2_trial_1_14603017.abf']526 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']527 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014528 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70529 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5530 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')531 def initfly_166(self,flynum):532 fly_db = self.fly_db533 fly_db.create_group(flynum)534 fly_record =fly_db[flynum]535 fly_record['flynum'] = flynum536 fly_record.create_group('experiments')537 fly_record['experiments'].create_group('img_starfield_t2_rep1')538 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')539 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0166_rotating_starfield_imaging_T2_trial_1_14605000.abf']540 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']541 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014542 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70543 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5544 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')545 def initfly_167(self,flynum):546 fly_db = self.fly_db547 fly_db.create_group(flynum)548 fly_record =fly_db[flynum]549 fly_record['flynum'] = flynum550 fly_record.create_group('experiments')551 fly_record['experiments'].create_group('img_starfield_t2_rep1')552 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')553 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0167_rotating_starfield_imaging_T2_trial_1_14605001.abf']554 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']555 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014556 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70557 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5558 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')559 def initfly_168(self,flynum):560 fly_db = self.fly_db561 fly_db.create_group(flynum)562 fly_record =fly_db[flynum]563 fly_record['flynum'] = flynum564 fly_record.create_group('experiments')565 fly_record['experiments'].create_group('img_starfield_t2_rep1')566 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')567 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0168_rotating_starfield_imaging_T2_trial_1_14605002.abf']568 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']569 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014570 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70571 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5572 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')573 def initfly_169(self,flynum):574 fly_db = self.fly_db575 fly_db.create_group(flynum)576 fly_record =fly_db[flynum]577 fly_record['flynum'] = flynum578 fly_record.create_group('experiments')579 fly_record['experiments'].create_group('img_starfield_t2_rep1')580 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')581 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0169_rotating_starfield_imaging_T2_trial_1_14605004.abf']582 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']583 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014584 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70585 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5586 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')587 #######588 #######589 #######590 def initfly_170(self,flynum):591 fly_db = self.fly_db592 fly_db.create_group(flynum)593 fly_record =fly_db[flynum]594 fly_record['flynum'] = flynum595 fly_record.create_group('experiments')596 fly_record['experiments'].create_group('img_starfield_t2_rep1')597 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')598 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0170_rotating_starfield_imaging_T2_trial_1_14605004.abf']599 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']600 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014601 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70602 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5603 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')604 def initfly_171(self,flynum):605 fly_db = self.fly_db606 fly_db.create_group(flynum)607 fly_record =fly_db[flynum]608 fly_record['flynum'] = flynum609 fly_record.create_group('experiments')610 fly_record['experiments'].create_group('img_starfield_t2_rep1')611 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')612 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0171_rotating_starfield_imaging_T2_trial_1_14605004.abf']613 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']614 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014615 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70616 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5617 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')618 def initfly_172(self,flynum):619 fly_db = self.fly_db620 fly_db.create_group(flynum)621 fly_record =fly_db[flynum]622 fly_record['flynum'] = flynum623 fly_record.create_group('experiments')624 fly_record['experiments'].create_group('img_starfield_t2_rep1')625 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')626 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0172_rotating_starfield_imaging_T2_trial_1_14605004.abf']627 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']628 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014629 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70630 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5631 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')632 def initfly_173(self,flynum):633 fly_db = self.fly_db634 fly_db.create_group(flynum)635 fly_record =fly_db[flynum]636 fly_record['flynum'] = flynum637 fly_record.create_group('experiments')638 fly_record['experiments'].create_group('img_starfield_t2_rep1')639 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')640 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0173_rotating_starfield_imaging_T2_trial_1_14605004.abf']641 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']642 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014643 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70644 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5645 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')646 def initfly_174(self,flynum):647 fly_db = self.fly_db648 fly_db.create_group(flynum)649 fly_record =fly_db[flynum]650 fly_record['flynum'] = flynum651 fly_record.create_group('experiments')652 fly_record['experiments'].create_group('img_starfield_t2_rep1')653 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')654 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0174_rotating_starfield_imaging_T2_trial_1_14605004.abf']655 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']656 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014657 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70658 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5659 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')660 def initfly_175(self,flynum):661 fly_db = self.fly_db662 fly_db.create_group(flynum)663 fly_record =fly_db[flynum]664 fly_record['flynum'] = flynum665 fly_record.create_group('experiments')666 fly_record['experiments'].create_group('img_starfield_t2_rep1')667 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')668 fly_record['experiments']['img_starfield_t2_rep1']['axon_file_names'] = ['fly0175_rotating_starfield_imaging_T2_trial_1_14605004.abf']669 fly_record['experiments']['img_starfield_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']670 fly_record['experiments']['img_starfield_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_0_2014671 fly_record['experiments']['img_starfield_t2_rep1']['imaging_frame_rate_guess'] = 70672 fly_record['experiments']['img_starfield_t2_rep1']['ol_epoch_duration'] = 4.5673 fly_record['experiments']['img_starfield_t2_rep1'].create_group('sequences')674 def initfly_176(self,flynum):675 fly_db = self.fly_db676 fly_db.create_group(flynum)677 fly_record =fly_db[flynum]678 fly_record['flynum'] = flynum679 fly_record.create_group('experiments')680 fly_record['experiments'].create_group('img_starfields2_t2_rep1')681 fly_record['experiments']['img_starfields2_t2_rep1']['axon_file_names'] = ['T2_trial1_14630005.abf']682 fly_record['experiments']['img_starfields2_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']683 fly_record['experiments']['img_starfields2_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_29_2014684 fly_record['experiments']['img_starfields2_t2_rep1']['imaging_frame_rate_guess'] = 70685 fly_record['experiments']['img_starfields2_t2_rep1']['ol_epoch_duration'] = 3.5686 fly_record['experiments']['img_starfields2_t2_rep1'].create_group('sequences')687 fly_record['experiments'].create_group('img_starfields2_t2_rep2')688 fly_record['experiments']['img_starfields2_t2_rep2']['axon_file_names'] = ['T2_trial2_14630008.abf']689 fly_record['experiments']['img_starfields2_t2_rep2']['tiff_file_names'] = ['/T2_trial2/T2_trial2_MMStack.ome.tif']690 fly_record['experiments']['img_starfields2_t2_rep2']['sequence_pattern_names'] = starfield_pattern_names_6_29_2014691 fly_record['experiments']['img_starfields2_t2_rep2']['imaging_frame_rate_guess'] = 70692 fly_record['experiments']['img_starfields2_t2_rep2']['ol_epoch_duration'] = 3.5693 fly_record['experiments']['img_starfields2_t2_rep2'].create_group('sequences')694 def initfly_177(self,flynum):695 fly_db = self.fly_db696 fly_db.create_group(flynum)697 fly_record =fly_db[flynum]698 fly_record['flynum'] = flynum699 fly_record.create_group('experiments')700 fly_record['experiments'].create_group('img_starfields2_t2_rep1')701 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')702 fly_record['experiments']['img_starfields2_t2_rep1']['axon_file_names'] = ['T2_trial1_14630009.abf']703 fly_record['experiments']['img_starfields2_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']704 fly_record['experiments']['img_starfields2_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_29_2014705 fly_record['experiments']['img_starfields2_t2_rep1']['imaging_frame_rate_guess'] = 70706 fly_record['experiments']['img_starfields2_t2_rep1']['ol_epoch_duration'] = 3.5707 fly_record['experiments']['img_starfields2_t2_rep1'].create_group('sequences')708 fly_record['experiments'].create_group('img_starfields2_t2_rep2')709 fly_record['experiments']['img_starfields2_t2_rep2']['axon_file_names'] = ['T2_trial2_14630010.abf']710 fly_record['experiments']['img_starfields2_t2_rep2']['tiff_file_names'] = ['/T2_trial2/T2_trial2_MMStack.ome.tif']711 fly_record['experiments']['img_starfields2_t2_rep2']['sequence_pattern_names'] = starfield_pattern_names_6_29_2014712 fly_record['experiments']['img_starfields2_t2_rep2']['imaging_frame_rate_guess'] = 70713 fly_record['experiments']['img_starfields2_t2_rep2']['ol_epoch_duration'] = 3.5714 fly_record['experiments']['img_starfields2_t2_rep2'].create_group('sequences')715 def initfly_178(self,flynum):716 fly_db = self.fly_db717 fly_db.create_group(flynum)718 fly_record =fly_db[flynum]719 fly_record['flynum'] = flynum720 fly_record.create_group('experiments')721 fly_record['experiments'].create_group('img_starfields2_t2_rep1')722 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')723 fly_record['experiments']['img_starfields2_t2_rep1']['axon_file_names'] = ['T2_trial1_14630014.abf']724 fly_record['experiments']['img_starfields2_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']725 fly_record['experiments']['img_starfields2_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_29_2014726 fly_record['experiments']['img_starfields2_t2_rep1']['imaging_frame_rate_guess'] = 70727 fly_record['experiments']['img_starfields2_t2_rep1']['ol_epoch_duration'] = 3.5728 fly_record['experiments']['img_starfields2_t2_rep1'].create_group('sequences')729 fly_record['experiments'].create_group('img_starfields2_t2_rep2')730 fly_record['experiments']['img_starfields2_t2_rep2']['axon_file_names'] = ['T2_trial2_14630016.abf']731 fly_record['experiments']['img_starfields2_t2_rep2']['tiff_file_names'] = ['/T2_trial2/T2_trial2_MMStack.ome.tif']732 fly_record['experiments']['img_starfields2_t2_rep2']['sequence_pattern_names'] = starfield_pattern_names_6_29_2014733 fly_record['experiments']['img_starfields2_t2_rep2']['imaging_frame_rate_guess'] = 70734 fly_record['experiments']['img_starfields2_t2_rep2']['ol_epoch_duration'] = 3.5735 fly_record['experiments']['img_starfields2_t2_rep2'].create_group('sequences')736 def initfly_179(self,flynum):737 fly_db = self.fly_db738 fly_db.create_group(flynum)739 fly_record =fly_db[flynum]740 fly_record['flynum'] = flynum741 fly_record.create_group('experiments')742 fly_record['experiments'].create_group('img_starfields2_t2_rep1')743 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')744 fly_record['experiments']['img_starfields2_t2_rep1']['axon_file_names'] = ['T2_trial1_14701000.abf']745 fly_record['experiments']['img_starfields2_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']746 fly_record['experiments']['img_starfields2_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_29_2014747 fly_record['experiments']['img_starfields2_t2_rep1']['imaging_frame_rate_guess'] = 70748 fly_record['experiments']['img_starfields2_t2_rep1']['ol_epoch_duration'] = 3.5749 fly_record['experiments']['img_starfields2_t2_rep1'].create_group('sequences')750 fly_record['experiments'].create_group('img_starfields2_t2_rep2')751 fly_record['experiments']['img_starfields2_t2_rep2']['axon_file_names'] = ['T2_trial2_14701001.abf']752 fly_record['experiments']['img_starfields2_t2_rep2']['tiff_file_names'] = ['/T2_trial2/T2_trial2_MMStack.ome.tif']753 fly_record['experiments']['img_starfields2_t2_rep2']['sequence_pattern_names'] = starfield_pattern_names_6_29_2014754 fly_record['experiments']['img_starfields2_t2_rep2']['imaging_frame_rate_guess'] = 70755 fly_record['experiments']['img_starfields2_t2_rep2']['ol_epoch_duration'] = 3.5756 fly_record['experiments']['img_starfields2_t2_rep2'].create_group('sequences')757 def initfly_180(self,flynum):758 fly_db = self.fly_db759 fly_db.create_group(flynum)760 fly_record =fly_db[flynum]761 fly_record['flynum'] = flynum762 fly_record.create_group('experiments')763 fly_record['experiments'].create_group('img_starfields2_t2_rep1')764 fly_record['experiments']['img_starfields2_t2_rep1']['axon_file_names'] = ['T2_trial1_14701006.abf']765 fly_record['experiments']['img_starfields2_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']766 fly_record['experiments']['img_starfields2_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_29_2014767 fly_record['experiments']['img_starfields2_t2_rep1']['imaging_frame_rate_guess'] = 70768 fly_record['experiments']['img_starfields2_t2_rep1']['ol_epoch_duration'] = 3.5769 fly_record['experiments']['img_starfields2_t2_rep1'].create_group('sequences')770 fly_record['experiments'].create_group('img_starfields2_t2_rep2')771 fly_record['experiments']['img_starfields2_t2_rep2']['axon_file_names'] = ['T2_trial2_14701008.abf']772 fly_record['experiments']['img_starfields2_t2_rep2']['tiff_file_names'] = ['/T2_trial2/T2_trial2_MMStack.ome.tif']773 fly_record['experiments']['img_starfields2_t2_rep2']['sequence_pattern_names'] = starfield_pattern_names_6_29_2014774 fly_record['experiments']['img_starfields2_t2_rep2']['imaging_frame_rate_guess'] = 70775 fly_record['experiments']['img_starfields2_t2_rep2']['ol_epoch_duration'] = 3.5776 fly_record['experiments']['img_starfields2_t2_rep2'].create_group('sequences')777 778 def initfly_181(self,flynum):779 fly_db = self.fly_db780 fly_db.create_group(flynum)781 fly_record =fly_db[flynum]782 fly_record['flynum'] = flynum783 fly_record.create_group('experiments')784 fly_record['experiments'].create_group('img_starfields2_t2_rep1')785 #fly_record['experiments'].create_group('b1_azm_expansion_tuning')786 fly_record['experiments']['img_starfields2_t2_rep1']['axon_file_names'] = ['T2_trial1_14701009.abf']787 fly_record['experiments']['img_starfields2_t2_rep1']['tiff_file_names'] = ['/T2_trial1/T2_trial1_MMStack.ome.tif']788 fly_record['experiments']['img_starfields2_t2_rep1']['sequence_pattern_names'] = starfield_pattern_names_6_29_2014789 fly_record['experiments']['img_starfields2_t2_rep1']['imaging_frame_rate_guess'] = 70790 fly_record['experiments']['img_starfields2_t2_rep1']['ol_epoch_duration'] = 3.5791 fly_record['experiments']['img_starfields2_t2_rep1'].create_group('sequences')792 fly_record['experiments'].create_group('img_starfields2_t2_rep2')793 fly_record['experiments']['img_starfields2_t2_rep2']['axon_file_names'] = ['T2_trial2_14701010.abf']794 fly_record['experiments']['img_starfields2_t2_rep2']['tiff_file_names'] = ['/T2_trial2/T2_trial2_MMStack.ome.tif']795 fly_record['experiments']['img_starfields2_t2_rep2']['sequence_pattern_names'] = starfield_pattern_names_6_29_2014796 fly_record['experiments']['img_starfields2_t2_rep2']['imaging_frame_rate_guess'] = 70797 fly_record['experiments']['img_starfields2_t2_rep2']['ol_epoch_duration'] = 3.5...
test_instance_group.py
Source:test_instance_group.py
1# Licensed under the Apache License, Version 2.0 (the "License"); you may2# not use this file except in compliance with the License. You may obtain3# a copy of the License at4#5# http://www.apache.org/licenses/LICENSE-2.06#7# Unless required by applicable law or agreed to in writing, software8# distributed under the License is distributed on an "AS IS" BASIS, WITHOUT9# WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the10# License for the specific language governing permissions and limitations11# under the License.12import mock13from oslo_utils.fixture import uuidsentinel as uuids14from oslo_versionedobjects import fixture as ovo_fixture15from nova import context16from nova.db.sqlalchemy import api_models17from nova import exception18from nova import objects19from nova.objects import base20from nova import test21class InstanceGroupObjectTestCase(test.TestCase):22 def setUp(self):23 super(InstanceGroupObjectTestCase, self).setUp()24 self.context = context.RequestContext('fake-user', 'fake-project')25 def _api_group(self, **values):26 group = objects.InstanceGroup(context=self.context,27 user_id=self.context.user_id,28 project_id=self.context.project_id,29 name='foogroup',30 policy='anti-affinity',31 rules={'max_server_per_host': 1},32 members=['memberfoo'])33 group.update(values)34 group.create()35 return group36 def test_create(self):37 create_group = self._api_group()38 db_group = create_group._get_from_db_by_uuid(self.context,39 create_group.uuid)40 self.assertIsInstance(db_group.policy, api_models.InstanceGroupPolicy)41 self.assertEqual(create_group.policies[0], db_group.policy.policy)42 self.assertEqual(create_group.id, db_group.policy.group_id)43 ovo_fixture.compare_obj(44 self, create_group, db_group,45 comparators={'policy': lambda a, b: b == a.policy},46 allow_missing=('deleted', 'deleted_at', 'policies', '_rules'))47 self.assertEqual({'max_server_per_host': 1}, create_group.rules)48 def test_destroy(self):49 create_group = self._api_group()50 create_group.destroy()51 self.assertRaises(exception.InstanceGroupNotFound,52 create_group._get_from_db_by_uuid, self.context,53 create_group.uuid)54 @mock.patch('nova.compute.utils.notify_about_server_group_update')55 def test_save(self, _mock_notify):56 create_group = self._api_group()57 create_group.members = ['memberbar1', 'memberbar2']58 create_group.name = 'anewname'59 create_group.save()60 db_group = create_group._get_from_db_by_uuid(self.context,61 create_group.uuid)62 ovo_fixture.compare_obj(63 self, create_group, db_group,64 comparators={'policy': lambda a, b: b == a.policy},65 allow_missing=('deleted', 'deleted_at', 'policies', '_rules'))66 self.assertEqual({'max_server_per_host': 1}, create_group.rules)67 def test_add_members(self):68 create_group = self._api_group()69 new_member = ['memberbar']70 objects.InstanceGroup.add_members(self.context, create_group.uuid,71 new_member)72 db_group = create_group._get_from_db_by_uuid(self.context,73 create_group.uuid)74 self.assertEqual(create_group.members + new_member, db_group.members)75 def test_add_members_to_group_with_no_members(self):76 create_group = self._api_group(members=[])77 new_member = ['memberbar']78 objects.InstanceGroup.add_members(self.context, create_group.uuid,79 new_member)80 db_group = create_group._get_from_db_by_uuid(self.context,81 create_group.uuid)82 self.assertEqual(new_member, db_group.members)83 def test_remove_members(self):84 create_group = self._api_group(members=[])85 # Add new members.86 new_members = [uuids.instance1, uuids.instance2, uuids.instance3]87 objects.InstanceGroup.add_members(self.context, create_group.uuid,88 new_members)89 # We already have tests for adding members, so we don't have to90 # verify they were added.91 # Remove the first two members we added.92 objects.InstanceGroup._remove_members_in_db(self.context,93 create_group.id,94 new_members[:2])95 # Refresh the group from the database.96 db_group = create_group._get_from_db_by_uuid(self.context,97 create_group.uuid)98 # We should have one new member left.99 self.assertEqual([uuids.instance3], db_group.members)100 def test_get_by_uuid(self):101 create_group = self._api_group()102 get_group = objects.InstanceGroup.get_by_uuid(self.context,103 create_group.uuid)104 self.assertTrue(base.obj_equal_prims(create_group, get_group))105 def test_get_by_name(self):106 create_group = self._api_group()107 get_group = objects.InstanceGroup.get_by_name(self.context,108 create_group.name)109 self.assertTrue(base.obj_equal_prims(create_group, get_group))110 def test_get_by_instance_uuid(self):111 create_group = self._api_group(members=[uuids.instance])112 get_group = objects.InstanceGroup.get_by_instance_uuid(self.context,113 uuids.instance)114 self.assertTrue(base.obj_equal_prims(create_group, get_group))115 def test_get_by_project_id(self):116 create_group = self._api_group()117 get_groups = objects.InstanceGroupList.get_by_project_id(118 self.context, self.context.project_id)119 self.assertEqual(1, len(get_groups))120 self.assertTrue(base.obj_equal_prims(create_group, get_groups[0]))121 ovo_fixture.compare_obj(self, get_groups[0], create_group)122 def test_get_all(self):123 create_group = self._api_group()124 get_groups = objects.InstanceGroupList.get_all(self.context)125 self.assertEqual(1, len(get_groups))126 self.assertTrue(base.obj_equal_prims(create_group, get_groups[0]))127 ovo_fixture.compare_obj(self, get_groups[0], create_group)128 def test_get_counts(self):129 # _api_group() creates a group with project_id and user_id from130 # self.context by default131 self._api_group()132 self._api_group(project_id='foo')133 self._api_group(user_id='bar')134 # Count only across a project135 counts = objects.InstanceGroupList.get_counts(self.context, 'foo')136 self.assertEqual(1, counts['project']['server_groups'])137 self.assertNotIn('user', counts)138 # Count across a project and a user139 counts = objects.InstanceGroupList.get_counts(140 self.context, self.context.project_id,141 user_id=self.context.user_id)142 self.assertEqual(2, counts['project']['server_groups'])...
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