How to use _export method in Airtest

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ClientGUISerialisable.py

Source:ClientGUISerialisable.py

1import os2from qtpy import QtWidgets as QW3from hydrus.core import HydrusData4from hydrus.core import HydrusGlobals as HG5from hydrus.core import HydrusPaths6from hydrus.core import HydrusSerialisable7from hydrus.client import ClientSerialisable8from hydrus.client.gui import ClientGUIFunctions9from hydrus.client.gui import ClientGUIScrolledPanels10from hydrus.client.gui import QtPorting as QP11from hydrus.client.gui.widgets import ClientGUICommon12class PNGExportPanel( ClientGUIScrolledPanels.ReviewPanel ):13    14    def __init__( self, parent, payload_obj, title = None, description = None, payload_description = None ):15        16        ClientGUIScrolledPanels.ReviewPanel.__init__( self, parent )17        18        self._payload_obj = payload_obj19        20        self._filepicker = QP.FilePickerCtrl( self, wildcard = 'PNG (*.png)' )21        self._filepicker.SetSaveMode( True )22        23        flp_width = ClientGUIFunctions.ConvertTextToPixelWidth( self._filepicker, 64 )24        25        self._filepicker.setMinimumWidth( flp_width )26        27        self._title = QW.QLineEdit( self )28        29        self._payload_description = QW.QLineEdit( self )30        31        self._text = QW.QLineEdit( self )32        33        self._width = QP.MakeQSpinBox( self, min=100, max=4096 )34        35        self._export = ClientGUICommon.BetterButton( self, 'export', self.Export )36        37        #38        39        if payload_description is None:40            41            ( payload_description, payload_bytes ) = ClientSerialisable.GetPayloadDescriptionAndBytes( self._payload_obj )42            43        else:44            45            payload_bytes = ClientSerialisable.GetPayloadBytes( self._payload_obj )46            47            payload_description += ' - {}'.format( HydrusData.ToHumanBytes( len( payload_bytes ) ) )48            49        50        self._payload_description.setText( payload_description )51        52        self._payload_description.setEnabled( False )53        54        self._width.setValue( 512 )55        56        last_png_export_dir = HG.client_controller.new_options.GetNoneableString( 'last_png_export_dir' )57        58        if title is not None:59            60            name = title61            62        elif isinstance( self._payload_obj, HydrusSerialisable.SerialisableBaseNamed ):63            64            name = self._payload_obj.GetName()65            66        else:67            68            name = payload_description69            70        71        self._title.setText( name )72        73        if description is not None:74            75            self._text.setText( description )76            77        78        if last_png_export_dir is not None:79            80            filename = name + '.png'81            82            filename = HydrusPaths.SanitizeFilename( filename )83            84            path = os.path.join( last_png_export_dir, filename )85            86            self._filepicker.SetPath( path )87            88        89        self._Update()90        91        #92        93        rows = []94        95        rows.append( ( 'export path: ', self._filepicker ) )96        rows.append( ( 'title: ', self._title ) )97        rows.append( ( 'payload description: ', self._payload_description ) )98        rows.append( ( 'your description (optional): ', self._text ) )99        rows.append( ( 'png width: ', self._width ) )100        rows.append( ( '', self._export ) )101        102        gridbox = ClientGUICommon.WrapInGrid( self, rows )103        104        self.widget().setLayout( gridbox )105        106        self._filepicker.filePickerChanged.connect( self._Update )107        self._title.textChanged.connect( self._Update )108        109    110    def _Update( self ):111        112        problems = []113        114        path = self._filepicker.GetPath()115        116        if path == '' or path is None:117            118            problems.append( 'select a path' )119            120        121        if path is not None and not os.path.exists( os.path.dirname( path ) ):122            123            problems.append( 'please select a directory that exists' )124            125        126        if self._title.text() == '':127            128            problems.append( 'set a title' )129            130        131        if len( problems ) == 0:132            133            self._export.setText( 'export' )134            135            self._export.setEnabled( True )136            137        else:138            139            self._export.setText( ' and '.join(problems) )140            141            self._export.setEnabled( False )142            143        144    145    def Export( self ):146        147        width = self._width.value()148        149        payload_description = self._payload_description.text()150        payload_bytes = ClientSerialisable.GetPayloadBytes( self._payload_obj )151        152        title = self._title.text()153        text = self._text.text()154        path = self._filepicker.GetPath()155        156        if path is not None and path != '':157            158            base_dir = os.path.dirname( path )159            160            HG.client_controller.new_options.SetNoneableString( 'last_png_export_dir', base_dir )161            162        163        if not path.endswith( '.png' ):164            165            path += '.png'166            167        168        ClientSerialisable.DumpToPNG( width, payload_bytes, title, payload_description, text, path )169        170        self._export.setText( 'done!' )171        172        HG.client_controller.CallLaterQtSafe( self._export, 2.0, 'png export set text', self._export.setText, 'export' )173        174    175class PNGsExportPanel( ClientGUIScrolledPanels.ReviewPanel ):176    177    def __init__( self, parent, payload_objs ):178        179        ClientGUIScrolledPanels.ReviewPanel.__init__( self, parent )180        181        self._payload_objs = payload_objs182        183        self._directory_picker = QP.DirPickerCtrl( self )184        185        dp_width = ClientGUIFunctions.ConvertTextToPixelWidth( self._directory_picker, 52 )186        187        self._directory_picker.setMinimumWidth( dp_width )188        189        self._width = QP.MakeQSpinBox( self, min=100, max=4096 )190        191        self._export = ClientGUICommon.BetterButton( self, 'export', self.Export )192        193        #194        195        last_png_export_dir = HG.client_controller.new_options.GetNoneableString( 'last_png_export_dir' )196        197        if last_png_export_dir is not None:198            199            self._directory_picker.SetPath( last_png_export_dir )200            201        202        self._width.setValue( 512 )203        204        self._Update()205        206        #207        208        rows = []209        210        rows.append( ( 'export path: ', self._directory_picker ) )211        rows.append( ( 'png width: ', self._width ) )212        rows.append( ( '', self._export ) )213        214        gridbox = ClientGUICommon.WrapInGrid( self, rows )215        216        self.widget().setLayout( gridbox )217        218        self._directory_picker.dirPickerChanged.connect( self._Update )219        220    221    def _Update( self ):222        223        problems = []224        225        path = self._directory_picker.GetPath()226        227        if path is None or path == '':228            229            problems.append( 'select a path' )230            231        232        if len( problems ) == 0:233            234            self._export.setText( 'export' )235            236            self._export.setEnabled( True )237            238        else:239            240            self._export.setText( ' and '.join(problems) )241            242            self._export.setEnabled( False )243            244        245    246    def Export( self ):247        248        width = self._width.value()249        250        directory = self._directory_picker.GetPath()251        252        last_png_export_dir = directory253        254        if last_png_export_dir is not None and last_png_export_dir != '':255            256            HG.client_controller.new_options.SetNoneableString( 'last_png_export_dir', last_png_export_dir )257            258        259        for obj in self._payload_objs:260            261            ( payload_description, payload_bytes ) = ClientSerialisable.GetPayloadDescriptionAndBytes( obj )262            263            title = obj.GetName()264            text = ''265            path = os.path.join( directory, title )266            267            if not path.endswith( '.png' ):268                269                path += '.png'270                271            272            ClientSerialisable.DumpToPNG( width, payload_bytes, title, payload_description, text, path )273            274        275        self._export.setText( 'done!' )276        277        HG.client_controller.CallLaterQtSafe( self._export, 2.0, 'png export set text', self._export.setText, 'export' )278        ...

main.py

Source:main.py

1import os2import sys3import pandas4import numpy5sys.path.append(os.path.abspath('./lib'))6import dataPrep7import driftCorrection8import orderedParameter9import utils10excelFile = 'analysisLog.xlsx'11df = pandas.read_excel(excelFile,names=['inputDir','fps','pixelSize','flux'])12df.dropna(subset=['inputDir'],inplace=True)13for inputDir,fps,pixelSize,flux in df.values:14    print ('Processing %s' %(inputDir))15    16    if (os.name=='nt'):17        inputDir = inputDir.replace('/scratch/utkur','Z:')18    19    # dp = dataPrep.dataPrep(inputDir)20    # dp.convertGatanMovie()21    # dp.averageFrames(dp.outputPNGDir,dp.outputPNGDir+'_avg',20,'png')22    # dp.averageFrames(dp.outputNPYDir,dp.outputNPYDir+'_avg',10,'npy')23    # dp.averageFrames(dp.outputPNGDir,dp.outputDir,dp.numFrames,'png')24    # dp.rmdir(dp.outputPNGDir)25    # dp.rmdir(dp.outputNPYDir)26    27    # drift = driftCorrection.driftCorrection(inputDir,sigma=10)28    # drift.findDrift()29    # drift.smoothDrift()30    # drift.generateImages(numpy.load(drift.driftParamsSmoothFile),scale=0.25,radius=100)31    32    # utils.makeBeamBlockerMask(inputDir+'_Export/000001.png',inputDir+'_Export/beamBlockerMask.png')33    34    op = orderedParameter.orderedParameter(inputDir,inputDir+'_Export/output/data/driftCorrectionSmoothParams.npy',inputDir+'_Export/beamBlockerMask.png',pixelSize)35    op.calculateOP(distanceRangePixel=[100,1000],stepSize=100)36    # # op.calculateOP(distanceRangePixel=[100,1000],stepSize=50)37    38    # op.linePlot(array=inputDir+'_Export/output/data/meanArr-100_1000_100.npy',saveFile=inputDir+'_Export/output/plots/meanArr-100_1000_100.png')39    # op.linePlot(array=inputDir+'_Export/output/data/medianArr-100_1000_100.npy',saveFile=inputDir+'_Export/output/plots/medianArr-100_1000_100.png')40    # op.linePlot(array=inputDir+'_Export/output/data/stdArr-100_1000_100.npy',saveFile=inputDir+'_Export/output/plots/stdArr-100_1000_100.png')41    # op.linePlot(array=inputDir+'_Export/output/data/ordParamArr_mean-100_1000_100.npy',saveFile=inputDir+'_Export/output/plots/ordParamArr_mean-100_1000_100.png')42    # op.linePlot(array=inputDir+'_Export/output/data/ordParamArr_median-100_1000_100.npy',saveFile=inputDir+'_Export/output/plots/ordParamArr_median-100_1000_100.png')43    44    # op.linePlot(array=inputDir+'_Export/output/data/meanArr-100_1000_50.npy',saveFile=inputDir+'_Export/output/plots/meanArr-100_1000_50.png')45    # op.linePlot(array=inputDir+'_Export/output/data/medianArr-100_1000_50.npy',saveFile=inputDir+'_Export/output/plots/medianArr-100_1000_50.png')46    # op.linePlot(array=inputDir+'_Export/output/data/stdArr-100_1000_50.npy',saveFile=inputDir+'_Export/output/plots/stdArr-100_1000_50.png')47    # op.linePlot(array=inputDir+'_Export/output/data/ordParamArr_mean-100_1000_50.npy',saveFile=inputDir+'_Export/output/plots/ordParamArr_mean-100_1000_50.png')...

test_core.py

Source:test_core.py

1from pysb.testing import *2from pysb.core import *3from functools import partial4def test_component_names_valid():5    for name in 'a', 'B', 'AbC', 'dEf', '_', '_7', '__a01b__999x_x___':6        c = Component(name, _export=False)7        eq_(c.name, name)8def test_component_names_invalid():9    for name in 'a!', '!B', 'A!bC~`\\', '_!', '_!7', '__a01b  999x_x___!':10        assert_raises(InvalidComponentNameError, Component, name, _export=False)11def test_monomer():12    sites = ['x', 'y', 'z']13    states = {'y': ['foo', 'bar', 'baz'], 'x': ['e']}14    m = Monomer('A', sites, states, _export=False)15    assert_equal(m.sites, sites)16    assert_equal(m.site_states, states)17    assert_equal(type(m()), MonomerPattern)18    assert_raises(ValueError, Monomer, 'A', 'x', _export=False)19    assert_raises(Exception, Monomer, 'A', 'x', 'x', _export=False)20    assert_raises(Exception, Monomer, 'A', ['x'], {'y': ['a']}, _export=False)21    assert_raises(Exception, Monomer, 'A', ['x'], {'x': [1]}, _export=False)22@with_model23def test_monomer_model():24    Monomer('A')25    ok_(A in model.monomers)26    ok_(A in model.all_components())27    ok_(A not in model.all_components() - model.monomers)28@with_model29def test_initial():30    Monomer('A', ['s'])31    Parameter('A_0')32    Initial(A(s=None), A_0)33    assert_raises_iice = partial(assert_raises, InvalidInitialConditionError,34                                 Initial)35    assert_raises_iice('not a complexpattern', A_0)36    assert_raises_iice(A(), A_0)37    assert_raises_iice(A(s=None), A_0)38    assert_raises_iice(MatchOnce(A(s=None)), A_0)39@with_model40def test_model_pickle():41    import pickle42    A = Monomer('A', _export=False)43    B = Monomer('B', ['x', 'y'], {'x': ['e', 'f']}, _export=False)44    k = Parameter('k', 1.0, _export=False)45    r = Rule('r', A() + B(x='e', y=WILD) >> A() % B(x='f', y=None), k,46             _export=False)47    o = Observable('o', A() % B(), _export=False)48    e = Expression('e', k * o, _export=False)49    c = Compartment('c', None, 3, k, _export=False)50    for comp in [A, B, k, r, o, e, c]:51        model.add_component(comp)52    model.add_component(c)53    Initial(A() ** c, k)54    assert_equal(len(model.all_components()), 7)55    model2 = pickle.loads(pickle.dumps(model))...

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