How to use biggerBox method in fMBT

Best Python code snippet using fMBT_python

ManageVars.py

Source:ManageVars.py Github

copy

Full Screen

1# -*- coding: utf-8 -*-2# Copyright 2015 Pietro Brunetti <pietro.brunetti@itb.cnr.it>3#4# Licensed under the Apache License, Version 2.0 (the "License");5# you may not use this file except in compliance with the License.6# You may obtain a copy of the License at7#8# http://www.apache.org/licenses/LICENSE-2.0910# Unless required by applicable law or agreed to in writing, software11# distributed under the License is distributed on an "AS IS" BASIS,12# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.13# See the License for the specific language governing permissions and14# limitations under the License.1516""" Managing variable values """1718__authors__ = "Pietro Brunetti"1920import os2122import wx23import wx.lib.filebrowsebutton as filebrowse24import wx.lib.agw.floatspin as FS2526from peptidome import fasta_indx2728import DialogCommons2930wildcard_f = "Fasta File (*.fasta)|*.fasta|Aminoacids Fasta File(*.faa)|*.faa"3132class Dialog(wx.Dialog):33 """ Dialog for the variable managing"""34 def __init__(self, parent, ID, title, size=wx.DefaultSize,35 pos=wx.DefaultPosition, style=wx.DEFAULT_DIALOG_STYLE):36 szr = DialogCommons.createMainSizer(self, parent, ID, title,37 pos, size, style)38 self._createMegabox(szr)39 DialogCommons.createBtnSizer(self, szr)40 self.SetSizer(szr)41 szr.Fit(self)424344 def _createMegabox(self, sizer):45 self.megabox = wx.BoxSizer(wx.VERTICAL)46 self._createFastaButton()47 self._createEnzymeChoice()48 self._createMissCutSpinCtrl()49 self._createDeltaPrecisionBox()50 self._setInitialState(self.megabox, sizer)5152 def _createFastaButton(self):53 fileDB = self.GetParent().fileDB54 if not fileDB.has_key("proteome"):55 self.fasta_path = os.path.expanduser("~")56 else:57 if not os.path.isfile(fileDB["proteome"]["fasta_path"]):58 self.fasta_path = os.path.expanduser("~")59 else:60 self.fasta_path = fileDB["proteome"]["fasta_path"]61 self.cF = filebrowse.FileBrowseButton(self,62 labelText="Select a fasta file:",63 fileMask=wildcard_f,64 fileMode=wx.OPEN,65 initialValue=self.fasta_path,66 changeCallback = self._faCallback)6768 self.megabox.Add(self.cF, 0,69 wx.GROW|wx.ALIGN_CENTER_VERTICAL|wx.ALL, 5)7071 def _createEnzymeChoice(self):72 self.st2 = wx.StaticText(self, -1, "Enzyme", (45, 15))73 enzymeList = ["No enzyme",74 "Trypsin (K or R)",75 "Trypsin (complex rule)",76 "Pepsin (A, V, L, I, G, F, Y or W)",77 "Proteinase K (F, Y, W or L)"]78 self.chEnz = wx.Choice(self, -1, (100, 50), choices = enzymeList)79 self._setHorizontal([self.st2, self.chEnz], self.megabox)80 self.Bind(wx.EVT_CHOICE, self._enable_misscut, self.chEnz)8182 def _enable_misscut(self, event):83 if self.chEnz.GetSelection() != 0:84 self.chMC.Enable(True)85 else:86 self.chMC.Enable(False)878889 def _createMissCutSpinCtrl(self):90 self.st = wx.StaticText(self, -1, "Miss-cleavage value",91 (45, 15))92 self.chMC = wx.SpinCtrl(self, -1, "", (30, 50))93 self.chMC.SetRange(0,5)94 self.chMC.SetValue(0)95 self._setHorizontal([self.st, self.chMC], self.megabox)96 self.chMC.Enable(False)9798 def _createDeltaPrecisionBox(self):99 #self._createDigitsControl()100 self._createPrecisionControl()101102 def _createDigitsControl(self):103 self.sc = wx.SpinCtrl(self, -1, "", (30, 50))104 self.sc.SetRange(1, 5)105 self.sc.SetValue(3)106 sd = wx.Button(self, -1, "Set Digits")107 self.Bind(wx.EVT_BUTTON, self.SetDigits, sd)108 self._setHorizontal([self.sc, sd], self.megabox)109110 def _createPrecisionControl(self):111 label = wx.StaticText(self, -1, "Delta mass [Da]")112 self.floatspin = FS.FloatSpin(self, -1, min_val=0, max_val=1,113 increment=0.001, value=0.008)114 #, extrastyle=FS.FS_LEFT)115 self.floatspin.SetFormat("%f")116 self.floatspin.SetDigits(3)117 self.floatspin.SetIncrement(10**(-3))118 self._setHorizontal([label, self.floatspin], self.megabox)119120 def _setHorizontal(self, ctrls, biggerBox):121 box = wx.BoxSizer(wx.HORIZONTAL)122 for each in ctrls:123 box.Add(each)124 biggerBox.Add(box, 0, wx.GROW|wx.ALIGN_CENTER_VERTICAL|wx.ALL, 5)125126 def _setInitialState(self, megabox, sizer):127 sizer.Add(megabox, 0, wx.GROW|wx.ALIGN_CENTER_VERTICAL|wx.ALL, 5)128129 def _faCallback(self, evt):130 self.fasta_path = evt.GetString()131132 def SetDigits(self, evt):133 """134 Set digits of precision135 """136 self.floatspin.SetValue(0.0)137 power = self.sc.GetValue()138 self.floatspin.SetDigits(power)139 self.floatspin.SetIncrement (10**-(power))140141142 def GetValue(self):143 #TO-DO: check if self.fasta_path is a valid file144 self.values = {}145 # the path fasta file is in Saf.name <-146 # but project does not report the name147 # use for the moment148 # >>> saf_obj = fileDB["proteome"]149 # >>> saf_obj.name = fileDB["fasta"]150 self.values["proteome"] = fasta_indx.Saf(self.fasta_path, window=True)151 self.values["delta"] = self.floatspin.GetValue()*(10**5)152153 self.values["enzyme"] = self.chEnz.GetSelection()154155 self.values["enzyme_exception"] = None156 self.values["miscut"] = self.chMC.GetValue()157 return self.values158159if __name__ == "__main__":160 app = wx.App()161 Dialog(None, -1, "Test") ...

Full Screen

Full Screen

Day 17a.py

Source:Day 17a.py Github

copy

Full Screen

1puzzle_input = open("AdventOfCode2020/Day 17/puzzleinput.txt").read().splitlines()2test_input = open("AdventOfCode2020/Day 17/testinput.txt").read().splitlines()3from itertools import product4def FindAdjacent(coordinate,cubes):5 x,y,z = coordinate6 return [(x + dx,y + dy,z + dz) for dx,dy,dz in list(product([-1,0,1],repeat=3)) if (x + dx, y + dy, z + dz) in cubes and not (dx == dy == dz == 0)]7def CountAdjacent(coordinate,cubes,char):8 count = 09 for c in FindAdjacent(coordinate,cubes):10 count += (cubes[c] == char)11 return count12def Step(cubes, coordinates, xspan):13 newcubes = cubes.copy()14 biggerbox = set(product([x for x in range(xspan[0],xspan[1] + 1)],repeat=3))15 newcoordinates = biggerbox.difference(coordinates)16 for cd in newcoordinates:17 newcubes[cd] = "."18 coordinates = biggerbox.copy()19 if (3,3,-1) in newcoordinates:20 print("I'm new!")21 print(sorted(newcoordinates))22 for coordinate in coordinates:23 if coordinate in newcoordinates:24 if CountAdjacent(coordinate,cubes,"#") == 3:25 newcubes[coordinate] = "#"26 elif cubes[coordinate] == "#":27 if CountAdjacent(coordinate,cubes,"#") in [2,3]:28 newcubes[coordinate] = "#"29 else:30 newcubes[coordinate] = "."31 else:32 if CountAdjacent(coordinate,cubes,"#") == 3:33 newcubes[coordinate] = "#"34 else:35 newcubes[coordinate] = "."36 return newcubes, coordinates37def Display(cubes):38 for z in range(z_span[0],z_span[1]+1):39 for y in range(y_span[0],y_span[1]+1):40 for x in range(x_span[0],x_span[1]+1):41 print(cubes[(x,y,z)],end='')42 print()43 print()44states = dict()45x_span = (0,7)46y_span = (0,7)47z_span = (0,0)48coordinates = set(product([x for x in range(x_span[0],x_span[1] + 1)],repeat=3))49for coordinate in coordinates:50 states[coordinate] = '.'51for i,row in enumerate(puzzle_input):52 for j,state in enumerate(row):53 states[(j,i,0)] = state54Display(states)55for i in range(6):56 x_span = (x_span[0] - 1, x_span[1] + 1)57 y_span = (y_span[0] - 1, y_span[1] + 1)58 z_span = (z_span[0] - 1, z_span[1] + 1)59 states, coordinates = Step(states, coordinates, x_span)60 print("Step:",i)61 #Display(states)...

Full Screen

Full Screen

Day 17b.py

Source:Day 17b.py Github

copy

Full Screen

1puzzle_input = open("AdventOfCode2020/Day 17/puzzleinput.txt").read().splitlines()2test_input = open("AdventOfCode2020/Day 17/testinput.txt").read().splitlines()3from itertools import product4def FindAdjacent(coordinate,cubes):5 x,y,z,w = coordinate6 return [(x + dx,y + dy,z + dz,w + dw) for dx,dy,dz,dw in list(product([-1,0,1],repeat=4)) if (x + dx, y + dy, z + dz, w + dw) in cubes and not (dx == dy == dz == dw == 0)]7def CountAdjacent(coordinate,cubes,char):8 count = 09 for c in FindAdjacent(coordinate,cubes):10 count += (cubes[c] == char)11 return count12def Step(cubes, coordinates, xspan):13 newcubes = cubes.copy()14 biggerbox = set(product([x for x in range(xspan[0],xspan[1] + 1)],repeat=4))15 newcoordinates = biggerbox.difference(coordinates)16 for cd in newcoordinates:17 newcubes[cd] = "."18 coordinates = biggerbox.copy()19 for coordinate in coordinates:20 if coordinate in newcoordinates:21 if CountAdjacent(coordinate,cubes,"#") == 3:22 newcubes[coordinate] = "#"23 elif cubes[coordinate] == "#":24 if CountAdjacent(coordinate,cubes,"#") in [2,3]:25 newcubes[coordinate] = "#"26 else:27 newcubes[coordinate] = "."28 else:29 if CountAdjacent(coordinate,cubes,"#") == 3:30 newcubes[coordinate] = "#"31 else:32 newcubes[coordinate] = "."33 return newcubes, coordinates34def Display(cubes):35 for z in range(z_span[0],z_span[1]+1):36 for y in range(y_span[0],y_span[1]+1):37 for x in range(x_span[0],x_span[1]+1):38 print(cubes[(x,y,z)],end='')39 print()40 print()41states = dict()42x_span = (0,7)43y_span = (0,7)44z_span = (0,0)45w_span = (0,0)46coordinates = set(product([x for x in range(x_span[0],x_span[1] + 1)],repeat=4))47for coordinate in coordinates:48 states[coordinate] = '.'49for i,row in enumerate(puzzle_input):50 for j,state in enumerate(row):51 states[(j,i,0,0)] = state52#Display(states)53for i in range(6):54 x_span = (x_span[0] - 1, x_span[1] + 1)55 y_span = (y_span[0] - 1, y_span[1] + 1)56 z_span = (z_span[0] - 1, z_span[1] + 1)57 w_span = (w_span[0] - 1, w_span[1] + 1)58 states, coordinates = Step(states, coordinates, x_span)59 print("Step:",i)60 #Display(states)...

Full Screen

Full Screen

Automation Testing Tutorials

Learn to execute automation testing from scratch with LambdaTest Learning Hub. Right from setting up the prerequisites to run your first automation test, to following best practices and diving deeper into advanced test scenarios. LambdaTest Learning Hubs compile a list of step-by-step guides to help you be proficient with different test automation frameworks i.e. Selenium, Cypress, TestNG etc.

LambdaTest Learning Hubs:

YouTube

You could also refer to video tutorials over LambdaTest YouTube channel to get step by step demonstration from industry experts.

Run fMBT automation tests on LambdaTest cloud grid

Perform automation testing on 3000+ real desktop and mobile devices online.

Try LambdaTest Now !!

Get 100 minutes of automation test minutes FREE!!

Next-Gen App & Browser Testing Cloud

Was this article helpful?

Helpful

NotHelpful