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How to use get_acls method in autotest
Best Python code snippet using autotest_python
test_baton_api.py
Source:test_baton_api.py 
...20from serapis.storage.irods.baton_mappings import ACLMapping21# DATA OBJECT - related tests:22class GetACLSBatonDataObjectAPITest(unittest.TestCase):23 def test_get_acls_data_object(self):24 result = BatonDataObjectAPI._get_acls("/humgen/projects/serapis_staging/test-baton/test_acls.txt")25 expected = {ACL(user='ic4', zone='humgen', permission='READ'),26 ACL(user='ic4', zone='Sanger1', permission='READ'),27 ACL(user='humgenadmin', zone='humgen', permission='OWN'),28 ACL(user='mercury', zone='Sanger1', permission='OWN'),29 ACL(user='irods', zone='humgen', permission='OWN'),30 ACL(user='serapis', zone='humgen', permission='OWN')31 }32 self.assertSetEqual(result, expected)33class AddOrReplaceACLBatonDataObjectAPITest(unittest.TestCase):34 def setUp(self):35 self.fpath = "/humgen/projects/serapis_staging/test-baton/test_add_acls.txt"36 BatonDataObjectAPI.remove_all_acls(self.fpath)37 def tearDown(self):38 BatonDataObjectAPI.remove_all_acls(self.fpath)39 def test_get_or_replace_acls_when_adding_a_new_acl(self):40 added_acl = ACL(user='mp15', zone='humgen', permission='OWN')41 BatonDataObjectAPI.add_or_replace_acl(self.fpath, added_acl)42 acls_set = BatonDataObjectAPI.get_acls(self.fpath)43 found = False44 for acl in acls_set:45 if acl == added_acl:46 found = True47 self.assertTrue(found)48 def test_get_or_replace_acls_when_replacing_an_acl(self):49 added_acl = ACL(user='cn13', zone='humgen', permission='OWN')50 BatonDataObjectAPI.add_or_replace_acl(self.fpath, added_acl)51 acls_set = BatonDataObjectAPI.get_acls(self.fpath)52 self.assertSetEqual(acls_set, {added_acl})53 replacement_acl = ACL(user='cn13', zone='humgen', permission='READ')54 BatonDataObjectAPI.add_or_replace_acl(self.fpath, replacement_acl)55 acls_set = BatonDataObjectAPI.get_acls(self.fpath)56 self.assertSetEqual(acls_set, {replacement_acl})57class AddOrReplaceAsBatchDataObjectAPITest(unittest.TestCase):58 def setUp(self):59 self.fpath = "/humgen/projects/serapis_staging/test-baton/test_add_acls.txt"60 BatonDataObjectAPI.remove_all_acls(self.fpath)61 def test_add_or_replace_a_list_of_acls(self):62 self.acls = [63 ACL(user='cn13', zone='humgen', permission='READ'),64 ACL(user='mp15', zone='humgen', permission='READ')65 ]66 BatonDataObjectAPI.add_or_replace_a_list_of_acls(self.fpath, self.acls)67 self.acls_set = BatonDataObjectAPI.get_acls(self.fpath)68 self.assertEqual(len(self.acls_set), 2)69class RemoveACLsForAListOfUsersDataObjectAPITest(unittest.TestCase):70 def setUp(self):71 self.fpath = "/humgen/projects/serapis_staging/test-baton/test_add_acls.txt"72 BatonDataObjectAPI.remove_all_acls(self.fpath)73 self.acl = ACL(user='cn13', zone='humgen', permission='READ')74 BatonDataObjectAPI.add_or_replace_acl(self.fpath, self.acl)75 existing_acls = BatonDataObjectAPI.get_acls(self.fpath)76 self.assertEqual(len(existing_acls), 1)77 def test_remove_acls_for_a_list_of_users(self):78 BatonDataObjectAPI.remove_acls_for_a_list_of_users(self.fpath, [(self.acl.user, self.acl.zone)])79 existing_acls = BatonDataObjectAPI.get_acls(self.fpath)80 self.assertEqual(0, len(existing_acls))81 def tearDown(self):82 BatonDataObjectAPI.remove_all_acls(self.fpath)83class RemoveACLForUserDataObjectAPITest(unittest.TestCase):84 def setUp(self):85 self.fpath = "/humgen/projects/serapis_staging/test-baton/test_add_acls.txt"86 BatonDataObjectAPI.remove_all_acls(self.fpath)87 self.acl = ACL(user='cn13', zone='humgen', permission='READ')88 BatonDataObjectAPI.add_or_replace_acl(self.fpath, self.acl)89 existing_acls = BatonDataObjectAPI.get_acls(self.fpath)90 self.assertEqual(len(existing_acls), 1)91 def test_remove_acls_for_a_list_of_users(self):92 BatonDataObjectAPI.remove_acls_for_a_list_of_users(self.fpath, [(self.acl.user, self.acl.zone)])93 existing_acls = BatonDataObjectAPI.get_acls(self.fpath)94 self.assertEqual(0, len(existing_acls))95 def tearDown(self):96 BatonDataObjectAPI.remove_all_acls(self.fpath)97class RemoveAllACLSBatonDataObjectAPITest(unittest.TestCase):98 def setUp(self):99 self.fpath = "/humgen/projects/serapis_staging/test-baton/test_add_acls.txt"100 self.acls = [101 ACL(user='cn13', zone='humgen', permission='READ'),102 ACL(user='mp15', zone='humgen', permission='READ')103 ]104 BatonDataObjectAPI.add_or_replace_a_list_of_acls(self.fpath, self.acls)105 self.acls_set = BatonDataObjectAPI.get_acls(self.fpath)106 self.assertNotEqual(len(self.acls_set), 0)107 def test_remove_all_acls(self):108 BatonDataObjectAPI.remove_all_acls(self.fpath)109 acls_set = BatonDataObjectAPI.get_acls(self.fpath)110 self.assertEqual(set(), acls_set)111class AddMetadataBatonDataObjectAPITest(unittest.TestCase):112 def setUp(self):113 self.fpath = "/humgen/projects/serapis_staging/test-baton/test_metadata_add_rm.txt"114 self.meta_dict = {'sample': {'sample2'}, 'sample_id': {'-1'}}115 def test_add_metadata(self):116 BatonDataObjectAPI.add_metadata(self.fpath, self.meta_dict)117 metadata = BatonDataObjectAPI.get_all_metadata(self.fpath).to_dict()118 self.assertDictEqual(self.meta_dict, metadata)119 def tearDown(self):120 BatonDataObjectAPI.remove_metadata(self.fpath, self.meta_dict)121class RemoveMetadataBatonDataObjectAPITest(unittest.TestCase):122 def setUp(self):123 self.fpath = "/humgen/projects/serapis_staging/test-baton/test_metadata_add_rm.txt"124 self.meta_dict = {'sample': {'sample2'}, 'sample_id': {'-1'}}125 self.previous_meta = BatonDataObjectAPI.get_all_metadata(self.fpath)126 BatonDataObjectAPI.add_metadata(self.fpath, self.meta_dict)127 def test_remove_metadata(self):128 BatonDataObjectAPI.remove_metadata(self.fpath, self.meta_dict)129 crt_meta = BatonDataObjectAPI.get_all_metadata(self.fpath)130 self.assertEqual(crt_meta, self.previous_meta)131class UpdateMetadataBatonDataObjectAPITest(unittest.TestCase):132 def setUp(self):133 self.fpath = "/humgen/projects/serapis_staging/test-baton/test_metadata_add_rm.txt"134 BatonDataObjectAPI.add_metadata(self.fpath, {'uniq_key': {'first_value'}})135 def test_update_metadata(self):136 BatonDataObjectAPI.update_metadata(self.fpath, 'uniq_key', {'second_value'})137 updated_meta = BatonDataObjectAPI.get_all_metadata(self.fpath)138 values = updated_meta.get_avu('uniq_key')139 self.assertEqual(values, {'second_value'})140 def tearDown(self):141 BatonDataObjectAPI.remove_metadata(self.fpath, {'uniq_key': {'second_value'}})142class AddMetadataBatonCollectionAPITest(unittest.TestCase):143 def setUp(self):144 self.coll_path = "/humgen/projects/serapis_staging/test-baton/test_coll_metadata"145 self.meta_dict = {'key1': {'val1'}}146 def test_add_metadata(self):147 BatonCollectionAPI.add_metadata(self.coll_path, self.meta_dict)148 crt_meta_dict = BatonCollectionAPI.get_all_metadata(self.coll_path).to_dict()149 self.assertTrue('key1' in crt_meta_dict)150 def tearDown(self):151 BatonCollectionAPI.remove_metadata(self.coll_path, self.meta_dict)152class RemoveMetadataBatonCollectionAPITest(unittest.TestCase):153 def setUp(self):154 self.coll_path = "/humgen/projects/serapis_staging/test-baton/test_coll_metadata"155 self.meta_dict = {'key1': {'val1'}}156 BatonCollectionAPI.add_metadata(self.coll_path, self.meta_dict)157 crt_meta = BatonCollectionAPI.get_all_metadata(self.coll_path).to_dict()158 self.assertTrue('key1' in crt_meta)159 def test_rm_metadata(self):160 BatonCollectionAPI.remove_metadata(self.coll_path, self.meta_dict)161 new_meta = BatonCollectionAPI.get_all_metadata(self.coll_path).to_dict()162 self.assertFalse('key1' in new_meta)163class UpdateMetadataBatonCollectionAPITest(unittest.TestCase):164 def setUp(self):165 self.coll_path = "/humgen/projects/serapis_staging/test-baton/test_coll_metadata"166 self.meta_dict = {'key1': {'val1'}}167 BatonCollectionAPI.add_metadata(self.coll_path, self.meta_dict)168 crt_meta = BatonCollectionAPI.get_all_metadata(self.coll_path).to_dict()169 self.assertTrue('key1' in crt_meta)170 def test_update_metadata(self):171 BatonCollectionAPI.update_metadata(self.coll_path, 'key1', {'val2'})172 crt_meta = BatonCollectionAPI.get_all_metadata(self.coll_path).to_dict()173 self.assertTrue('key1' in crt_meta)174 self.assertSetEqual(crt_meta['key1'], {'val2'})175 def tearDown(self):176 BatonCollectionAPI.remove_metadata(self.coll_path, {'key1': {'val2'}})177class ListContentsBatonCollectionAPITest(unittest.TestCase):178 def setUp(self):179 self.coll_path = "/humgen/projects/serapis_staging/test-baton/test_coll_metadata"180 def test_list_contents(self):181 contents = BatonCollectionAPI.list_data_objects(self.coll_path)182 self.assertEqual(len(contents), 1)183 self.assertEqual(contents[0], "/humgen/projects/serapis_staging/test-baton/test_coll_metadata/test_list_coll.txt")184# ABSTRACT - NOT IMPLEMENTED METHODS TESTS:185class AbstractMethodsTests(unittest.TestCase):186 def test_get_connection(self):187 self.assertRaises(NotImplementedError, BatonBasicAPI._get_connection)188 def test_upload_basic(self):189 self.assertRaises(NotImplementedError, BatonBasicAPI.upload, '', '')190 def test_remove_basic(self):191 self.assertRaises(NotImplementedError, BatonBasicAPI.remove, '')192 def test_move_basic(self):193 self.assertRaises(NotImplementedError, BatonBasicAPI.move, '', '')194 def test_upload_data_object(self):195 self.assertRaises(NotImplementedError, BatonDataObjectAPI.upload, '', '')196 def test_remove_data_object(self):197 self.assertRaises(NotImplementedError, BatonDataObjectAPI.remove, '')198 def test_move_data_object(self):199 self.assertRaises(NotImplementedError, BatonDataObjectAPI.move, '', '')200 def test_upload_collection(self):201 self.assertRaises(NotImplementedError, BatonCollectionAPI.upload, '', '')202 def test_remove_collection(self):203 self.assertRaises(NotImplementedError, BatonCollectionAPI.remove, '')204 def test_move_collection(self):205 self.assertRaises(NotImplementedError, BatonCollectionAPI.move, '', '')206# COLLECTION - RELATED TESTS:207class GetACLSBatonCollectionAPITest(unittest.TestCase):208 def setUp(self):209 self.path = "/humgen/projects/serapis_staging/test-baton/test-collection-acls"210 BatonCollectionAPI.remove_all_acls(self.path)211 BatonCollectionAPI.add_or_replace_a_list_of_acls(self.path,212 [ACL(user='ic4', zone='humgen', permission='OWN'),213 ACL(user='ic4', zone='Sanger1', permission='READ')])214 def test_get_acls_collection(self):215 # TODO: modify the test so that it removes everything, and then adds the ACls before checking on their existence216 result = BatonCollectionAPI._get_acls(self.path)217 expected = {218 ACL(user='ic4', zone='humgen', permission='OWN'),219 ACL(user='ic4', zone='Sanger1', permission='READ'),220 }221 self.assertSetEqual(result, expected)222# class GetACLSBatonCollectionAPITest2(unittest.TestCase):223# def test_trigger_exception(self):224# result = BatonCollectionAPI.get_acls('/smth/non-existing')225# print("Results from trigger exception test; %s" % result)226 # self.assertEqual(1,2)227class RemoveAllACLSBatonCollectionAPITest(unittest.TestCase):228 def setUp(self):229 self.fpath = "/humgen/projects/serapis_staging/test-baton/test-collection-acls"230 self.acls = [231 ACL(user='cn13', zone='humgen', permission='READ'),232 ACL(user='mp15', zone='humgen', permission='READ')233 ]234 BatonCollectionAPI.add_or_replace_a_list_of_acls(self.fpath, self.acls)235 self.acls_set = BatonCollectionAPI.get_acls(self.fpath)236 self.assertNotEqual(len(self.acls_set), 0)237 def test_remove_all_acls(self):238 BatonCollectionAPI.remove_all_acls(self.fpath)239 acls_set = BatonCollectionAPI.get_acls(self.fpath)240 self.assertEqual(set(), acls_set)241class RemoveACLForUserCollectionAPITest(unittest.TestCase):242 def setUp(self):243 self.path = "/humgen/projects/serapis_staging/test-baton/test-collection-acls"244 BatonCollectionAPI.remove_all_acls(self.path)245 self.acl = ACL(user='cn13', zone='humgen', permission='READ')246 BatonCollectionAPI.add_or_replace_acl(self.path, self.acl)247 existing_acls = BatonCollectionAPI.get_acls(self.path)248 self.assertEqual(len(existing_acls), 1)249 def test_remove_acls_for_a_list_of_users(self):250 BatonCollectionAPI.remove_acls_for_a_list_of_users(self.path, [(self.acl.user, self.acl.zone)])251 existing_acls = BatonCollectionAPI.get_acls(self.path)252 self.assertEqual(0, len(existing_acls))253 def tearDown(self):254 BatonCollectionAPI.remove_all_acls(self.path)255class RemoveACLsForAListOfUsersCollectionAPITest(unittest.TestCase):256 def setUp(self):257 self.path = "/humgen/projects/serapis_staging/test-baton/test-collection-acls"258 BatonCollectionAPI.remove_all_acls(self.path)259 self.acl = ACL(user='cn13', zone='humgen', permission='READ')260 BatonCollectionAPI.add_or_replace_acl(self.path, self.acl)261 existing_acls = BatonCollectionAPI.get_acls(self.path)262 self.assertEqual(len(existing_acls), 1)263 def test_remove_acls_for_a_list_of_users(self):264 BatonCollectionAPI.remove_acls_for_a_list_of_users(self.path, [(self.acl.user, self.acl.zone)])265 existing_acls = BatonCollectionAPI.get_acls(self.path)266 self.assertEqual(0, len(existing_acls))267 def tearDown(self):268 BatonCollectionAPI.remove_all_acls(self.path)269class AddOrReplaceACLBatonCollectionAPITest(unittest.TestCase):270 def setUp(self):271 self.path = "/humgen/projects/serapis_staging/test-baton/test-collection-acls"272 BatonCollectionAPI.remove_all_acls(self.path)273 def tearDown(self):274 BatonCollectionAPI.remove_all_acls(self.path)275 def test_get_or_replace_acls_when_adding_a_new_acl(self):276 added_acl = ACL(user='mp15', zone='humgen', permission='OWN')277 BatonCollectionAPI.add_or_replace_acl(self.path, added_acl)278 acls_set = BatonCollectionAPI.get_acls(self.path)279 found = False280 for acl in acls_set:281 if acl == added_acl:282 found = True283 self.assertTrue(found)284 def test_get_or_replace_acls_when_replacing_an_acl(self):285 added_acl = ACL(user='cn13', zone='humgen', permission='OWN')286 BatonCollectionAPI.add_or_replace_acl(self.path, added_acl)287 acls_set = BatonCollectionAPI.get_acls(self.path)288 self.assertSetEqual(acls_set, {added_acl})289 replacement_acl = ACL(user='cn13', zone='humgen', permission='READ')290 BatonCollectionAPI.add_or_replace_acl(self.path, replacement_acl)291 acls_set = BatonCollectionAPI.get_acls(self.path)292 self.assertSetEqual(acls_set, {replacement_acl})293class AddOrReplaceAsBatchCollectionAPITest(unittest.TestCase):294 def setUp(self):295 self.path = "/humgen/projects/serapis_staging/test-baton/test-collection-acls"296 BatonCollectionAPI.remove_all_acls(self.path)297 def test_add_or_replace_a_list_of_acls(self):298 self.acls = [299 ACL(user='cn13', zone='humgen', permission='READ'),300 ACL(user='mp15', zone='humgen', permission='READ')301 ]302 BatonCollectionAPI.add_or_replace_a_list_of_acls(self.path, self.acls)303 self.acls_set = BatonCollectionAPI.get_acls(self.path)...
test_setaccess.py
Source:test_setaccess.py
1import unittest2from unittest import TestCase3import setaccess4class TestRequestPermissions(unittest.TestCase):5 def test_get_acls(self):6 # (self, lab, members, request, request_name, request_members, groups, fastqs):7 p = setaccess.RequestPermissions("labX",8 [{"pi": "kunga","member": "kunga","group": False}],9 "08822", "DLP",10 [{'request': '08822', 'member': 'mcmanamd', 'group': False}],11 ["cmoigo", "bicigo"],12 [" vialea"], # dataAccessEmails13 ["none"])14 print("ACL access list:\n" + p.get_acls())15 self.assertIn("A:g:bicigo@hpc.private:rxtncy", p.get_acls())16 self.assertIn("A::kunga@hpc.private:rxtncy", p.get_acls())17 self.assertIn("A::mcmanamd@hpc.private:rxtncy", p.get_acls())18 self.assertIn("A::vialea@hpc.private:rxtncy", p.get_acls())19 self.assertIn("A::grewald@hpc.private:rxtncy", p.get_acls())20 self.assertIn("A::GROUP@:rxtncCy", p.get_acls())21class Test(TestCase):22 def test_get_request_metadata(self):23 p = setaccess.get_request_metadata("08822", "none")24 print("Lab members for 08822 {}".format(p.members))25 print("Lab request members for 08822 {}".format(p.request_members))26 self.assertEqual("shuklan", p.lab)27 def test_get_request_metadata_invalid_request(self):28 p = setaccess.get_request_metadata("08822_XXX", "none")29 print("No information found from endpoint for: {}".format(p))...
get_acls.py
Source:get_acls.py
1# -*- coding: utf-8 -*-2import argparse3from . import cfg4from . import util5def get_acls(path, zkCli, server, config=None, auth=None):6 cmd = 'getAcl %s' % (path)7 auth_str = util.auth_to_auth_str(auth)8 stdout_list, stderr_list = util.exec(cmd, zkCli, server, config, auth_str)9 valid_stdout_list = util.filter_valid_list(stdout_list, ["'sasl", "'world", "'digest", ':'])10 if len(valid_stdout_list) % 2 != 0:11 cfg.logger.error('get_acls: not parse correctly: valid_stdout_list: %s', valid_stdout_list)12 return []13 acls = [''.join(valid_stdout_list[i:i + 2]).replace("'", '').replace(',', ':').replace(' ', '') for i in range(0, len(valid_stdout_list), 2)]14 return acls15def parse_args():16 ''' '''17 parser = argparse.ArgumentParser(description='zookeeper_util: get_children')18 parser.add_argument('-i', '--ini', type=str, required=True, help="ini filename")19 parser.add_argument('-p', '--path', type=str, required=True, help="path")20 parser.add_argument('-l', '--log_filename', type=str, default='', required=False, help="log filename")21 args = parser.parse_args()22 return None, args23def _main():24 error, args = parse_args()25 cfg.init(args.ini, args.log_filename)26 path = args.path27 zkCli = cfg.config.get('zkcli', None)28 server = cfg.config.get('server', None)29 config = cfg.config.get('config', None)30 auth = cfg.config.get('auth', None)31 acls = get_acls(path, zkCli, server, config, auth)32 cfg.logger.info('after get_acls: path: %s acls: %s', path, acls)33if __name__ == '__main__':...
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