How to use __setup method in pyatom
Best Python code snippet using pyatom_python
products.py
Source:products.py 
1# -*- coding: utf-8 -*-2# ==============================================================================3# COPYRIGHT (C) 1991 - 2003 EDF R&D WWW.CODE-ASTER.ORG4# THIS PROGRAM IS FREE SOFTWARE; YOU CAN REDISTRIBUTE IT AND/OR MODIFY5# IT UNDER THE TERMS OF THE GNU GENERAL PUBLIC LICENSE AS PUBLISHED BY6# THE FREE SOFTWARE FOUNDATION; EITHER VERSION 2 OF THE LICENSE, OR7# (AT YOUR OPTION) ANY LATER VERSION.8#9# THIS PROGRAM IS DISTRIBUTED IN THE HOPE THAT IT WILL BE USEFUL, BUT10# WITHOUT ANY WARRANTY; WITHOUT EVEN THE IMPLIED WARRANTY OF11# MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE. SEE THE GNU12# GENERAL PUBLIC LICENSE FOR MORE DETAILS.13#14# YOU SHOULD HAVE RECEIVED A COPY OF THE GNU GENERAL PUBLIC LICENSE15# ALONG WITH THIS PROGRAM; IF NOT, WRITE TO EDF R&D CODE_ASTER,16# 1 AVENUE DU GENERAL DE GAULLE, 92141 CLAMART CEDEX, FRANCE.17# ==============================================================================18"""This module defines SETUP instances for each products.19Functions are named : setup_`product`,20and have two main arguments : DEPENDENCIES and SUMMARY objects,21and additionnal arguments through 'kargs'.22"""23# Of course the order is not important... but it's easier to understand24# dependencies in the right order !25import sys26import os27import os.path as osp28import shutil29import re30import multiprocessing31from glob import glob32from __pkginfo__ import dict_prod, dict_prod_param33from products_data import (34 shell_escape,35 waf_template,36 mfront_env_template37)38from as_setup import (39 SETUP,40 GetSitePackages,41 less_than_version,42 export_parameters,43 relative_symlink,44 SetupInstallError,45 unexpandvars,46)47# ----- differ messages translation48def _(mesg): return mesg49# set/unset a value in a dict (cfg)50def set_cfg(setup_object, dico, var, value, **kargs):51 if not type(var) in (list, tuple):52 var = [var,]53 if not type(value) in (list, tuple):54 value = [value,]55 assert len(var) == len(value), 'ERROR in set_var : %r / %r' % (var, value)56 for k, v in zip(var, value):57 dico[k] = v58 setup_object._print('Setting %s=%s' % (k, v))59def add_flags(cfg, options):60 """Add compilation flags corresponding to the options."""61 if not type(options) in (list, tuple):62 options = [options,]63 _cmp_opts = ('CFLAGS', 'F90FLAGS',)64 _all_opts = _cmp_opts + ('LDFLAGS',)65 for opt in options:66 assert opt in ('OPENMP', 'I8'), "unsupported option!"67 for flag in _all_opts:68 flopt = flag + '_' + opt69 cfg[flag] = (cfg[flag] + ' ' + cfg.get(flopt, '')).strip()70 for flag in _cmp_opts:71 fldbg = flag + '_DBG'72 flopt = flag + '_' + opt73 cfg[fldbg] = (cfg[fldbg] + ' ' + cfg.get(flopt, '')).strip()74 for var in _all_opts:75 os.environ[var] = cfg[var]76def lib64_symlink(self, **kwargs):77 """Create a symlink lib to lib64."""78 if not osp.exists('lib'):79 relative_symlink('lib64', 'lib')80#-------------------------------------------------------------------------------81# 40. ----- Metis (standard version)82def setup_metis(dep, summary, **kargs):83 cfg=dep.cfg84 product='metis'85 version = dict_prod[product]86 pkg_name = '%s-%s' % (product, version)87 # ----- add (and check) product dependencies88 dep.Add(product,89 req=['ASTER_ROOT',],90 set=['HOME_METIS','LIB_METIS','D_METIS',],91 )92 cfg['HOME_METIS'] = osp.join(cfg['ASTER_ROOT'], 'public', pkg_name)93 cfg['LIB_METIS'] = "-lmetis"94 cfg['D_METIS'] = "-Dmetis"95 # metis596 actions = (97 ('IsInstalled', { 'filename' :98 [osp.join('__setup.installdir__', 'lib', 'libmetis.a'),99 osp.join('__setup.installdir__', 'include', 'metis.h'), ]100 } ),101 ('Extract' , {}),102 ('Configure', {103 'command': 'make -j 4 config prefix=%(dest)s openmp=openmp' % { 'dest' : cfg['HOME_METIS'] },104 }),105 ('Make' , { 'nbcpu' : max(multiprocessing.cpu_count(),kargs['find_tools'].nbcpu) }),106 ('Install' , {}),107 ('Clean', {}),108 )109 # metis4110 if version.startswith('4'):111 actions = (112 ('IsInstalled', { 'filename' :113 [osp.join('__setup.installdir__', 'lib', 'libmetis.a'),114 osp.join('__setup.installdir__', 'include', 'metis.h'), ]115 } ),116 ('Extract' , {}),117 ('ChgFiles' , {118 'files' : ['Makefile.in'],119 'dtrans' : cfg,120 }),121 ('Make' , { 'nbcpu' : max(multiprocessing.cpu_count(),kargs['find_tools'].nbcpu) }),122 ('Install' , {123 'command' : 'make -j 8 install prefix=%(dest)s ; ' \124 'cp Makefile.in %(dest)s' \125 % { 'dest' : cfg['HOME_METIS'] },126 }),127 ('Clean', {}),128 )129 # ----- setup instance130 setup=SETUP(131 product=product,132 version=version,133 description="""METIS is a software package for partitioning unstructured graphs,134 partitioning meshes, and computing fill-reducing orderings of sparse matrices.135 This version is for MUMPS needs.""",136 depend=dep,137 system=kargs['system'],138 log=kargs['log'],139 reinstall=kargs['reinstall'],140 actions=actions,141 installdir = cfg['HOME_METIS'],142 sourcedir = cfg['SOURCEDIR'],143 )144 return setup145# 40. ----- Metis (standard version)146def setup_parmetis(dep, summary, **kargs):147 cfg=dep.cfg148 product='parmetis'149 version = dict_prod[product]150 pkg_name = '%s-%s' % (product, version)151 # ----- add (and check) product dependencies152 dep.Add(product,153 req=['ASTER_ROOT',],154 set=['HOME_METIS','LIB_METIS','D_METIS'],155 )156 cfg['HOME_METIS'] = osp.join(cfg['ASTER_ROOT'], 'public', pkg_name)157 cfg['LIB_METIS'] = "-lparmetis -lmetis"158 cfg['D_METIS'] = "-Dmetis -Dparmetis"159 # metis5160 actions = (161 ('IsInstalled', { 'filename' :162 [#osp.join('__setup.installdir__', 'lib', 'libmetis.a'),163 osp.join('__setup.installdir__', 'lib', 'libparmetis.a'),164 # osp.join('__setup.installdir__', 'include', 'metis.h'),165 osp.join('__setup.installdir__', 'include', 'parmetis.h'), ]166 } ),167 ('Extract' , {}),168 ('Configure', {169 'command': 'make -j 8 config prefix=%(dest)s' % { 'dest' : cfg['HOME_METIS'] },170 }),171 ('Make' , { 'nbcpu' : max(multiprocessing.cpu_count(),kargs['find_tools'].nbcpu) }),172 ('Install' , {}),173 ('Clean', {}),174 )175 # metis4176 if version.startswith('4'):177 actions = (178 ('IsInstalled', { 'filename' :179 [osp.join('__setup.installdir__', 'lib', 'libmetis.a'),180 osp.join('__setup.installdir__', 'lib', 'libparmetis.a'),181 osp.join('__setup.installdir__', 'include', 'metis.h'),182 osp.join('__setup.installdir__', 'include', 'parmetis.h'), ]183 } ),184 ('Extract' , {}),185 ('Configure', {186 'command': 'make -j %(nbcpu)s config cc=%(CC)s cxx=%(CXX)s openmp=openmp prefix=%(dest)s'\187 % { 'nbcpu' : multiprocessing.cpu_count(),'CC' : cfg['CC'] ,188 'CXX' : cfg['CXX'] ,'dest' : cfg['HOME_METIS'] },189 }),190 # ('Make' , { 'nbcpu' : max(multiprocessing.cpu_count(),kargs['find_tools'].nbcpu) }),191 ('Install' , {192 'command' : 'make -j %(nbcpu)s install prefix=%(dest)s ;'193 'cp $(find $PWD -iname metis.h) %(dest)s/include;'194 'cp $(find $PWD -iname *libmetis.*) %(dest)s/lib' \195 % { 'nbcpu' : multiprocessing.cpu_count(),'dest' : cfg['HOME_METIS'] },196 }),197 ('Clean', {}),198 )199 # ----- setup instance200 setup=SETUP(201 product=product,202 version=version,203 description="""METIS is a software package for partitioning unstructured graphs,204 partitioning meshes, and computing fill-reducing orderings of sparse matrices.205 This version is for MUMPS needs.""",206 depend=dep,207 system=kargs['system'],208 log=kargs['log'],209 reinstall=kargs['reinstall'],210 actions=actions,211 installdir = cfg['HOME_METIS'],212 sourcedir = cfg['SOURCEDIR'],213 )214 return setup215#-------------------------------------------------------------------------------216# 43. ----- scotch217def setup_scotch(dep, summary, **kargs):218 cfg=dep.cfg219 product='scotch'220 version = dict_prod[product]221 pkg_name = '%s-%s' % (product, version)222 # ----- add (and check) product dependencies223 dep.Add(product,224 req=['ASTER_ROOT', 'FLEX', 'RANLIB', 'YACC'],225 set=['HOME_SCOTCH','LIB_SCOTCH','D_SCOTCH',],226 )227 cfg['HOME_SCOTCH'] =osp.join(cfg['ASTER_ROOT'], 'public', pkg_name)228 cfg['LIB_SCOTCH'] ="-lesmumps -lscotch -lscotcherr"229 cfg['D_SCOTCH'] ="-Dscotch"230 scotch_cfg = {}.fromkeys(['CC', 'CFLAGS', 'FLEX', 'RANLIB', 'YACC'], '')231 scotch_cfg.update(cfg)232 if cfg['PLATFORM'] != 'darwin':233 scotch_cfg['CFLAGS'] += ' -Wl,--no-as-needed'234 else:235 # OS X linker does not support '--no-as-needed'236 # plus it does not provide some *NIX clock timing and we must use an old timing method in Scotch (as used in Make.inc/Makefile.inc.i686_mac_darwin10)237 scotch_cfg['CFLAGS'] += ' -DCOMMON_TIMING_OLD -DCOMMON_PTHREAD_BARRIER'238 # ----- setup instance239 setup=SETUP(240 product=product,241 version=version,242 description="""Static mapping, graph partitioning, and sparse matrix block ordering package.""",243 depend=dep,244 system=kargs['system'],245 log=kargs['log'],246 reinstall=kargs['reinstall'],247 actions=(248 ('IsInstalled', { 'filename' :249 [osp.join('__setup.installdir__', 'lib', 'libesmumps.a'),250 osp.join('__setup.installdir__', 'lib', 'libscotch.a'),251 osp.join('__setup.installdir__', 'lib', 'libscotcherr.a'),252 osp.join('__setup.installdir__', 'lib', 'libscotcherrexit.a'),253 osp.join('__setup.installdir__', 'lib', 'libscotchmetis.a'),254 osp.join('__setup.installdir__', 'include', 'scotchf.h'),255 osp.join('__setup.installdir__', 'include', 'scotch.h') ]256 } ),257 ('Extract', {}),258 ('Configure', {259 'command': 'mv src/Makefile.inc src/Makefile.inc.orig ; '260 'cp src/Makefile.aster_full src/Makefile.inc',261 }),262 ('ChgFiles', {263 'files' : [osp.join('src', 'Makefile.inc'), ],264 'dtrans' : scotch_cfg,265 }),266 # remove librt on darwin267 cfg['PLATFORM'] != 'darwin' and (None, None) or \268 ('ChgFiles', {269 'files' : [osp.join('src', 'Makefile.inc'), ],270 'delimiter' : '',271 'dtrans' : { re.escape('-lrt'): ''},272 }),273 ('Make', {274 'path' : osp.join('__setup.workdir__', '__setup.content__', 'src'),275 'nbcpu' : multiprocessing.cpu_count(),#1, # seems not support "-j NBCPU" option276 }),277 # only if version >= 6278 version.startswith('5') and (None, None) or \279 ('Make', {280 'command': 'make esmumps',281 'path' : osp.join('__setup.workdir__', '__setup.content__', 'src'),282 # 'nbcpu' : multiprocessing.cpu_count(),#1, # seems not support "-j NBCPU" option283 }),284 ('Install', {'command' : 'make install prefix=%s' % cfg['HOME_SCOTCH'],285 'path' : osp.join('__setup.workdir__', '__setup.content__', 'src') }),286 ('Clean', {}),287 ),288 installdir = cfg['HOME_SCOTCH'],289 sourcedir = cfg['SOURCEDIR'],290 )291 return setup292#-------------------------------------------------------------------------------293# 43.2 ----- ptscotch294def setup_ptscotch(dep, summary, **kargs):295 cfg=dep.cfg296 product='scotch'297 version = dict_prod[product]298 pkg_name = '%s-%s' % (product, version)299 # ----- add (and check) product dependencies300 dep.Add(product,301 req=['ASTER_ROOT', 'FLEX', 'RANLIB', 'YACC'],302 set=['HOME_SCOTCH','LIB_SCOTCH','D_SCOTCH',],303 )304 cfg['HOME_SCOTCH']=osp.join(cfg['ASTER_ROOT'], 'public', pkg_name)305 cfg['LIB_SCOTCH'] ="-lptesmumps -lscotch -lptscotch -lptscotcherr"306 cfg['D_SCOTCH'] ="-Dscotch -Dptscotch"307 scotch_cfg = {}.fromkeys(['CC', 'CFLAGS', 'FLEX', 'RANLIB', 'YACC'], '')308 scotch_cfg.update(cfg)309 if cfg['PLATFORM'] != 'darwin':310 scotch_cfg['CFLAGS'] += ' -Wl,--no-as-needed'311 else:312 # OS X linker does not support '--no-as-needed'313 # plus it does not provide some *NIX clock timing and we must use an old timing method in Scotch (as used in Make.inc/Makefile.inc.i686_mac_darwin10)314 scotch_cfg['CFLAGS'] += ' -DCOMMON_TIMING_OLD -DCOMMON_PTHREAD_BARRIER'315 # ----- setup instance316 setup=SETUP(317 product=product,318 version=version,319 description="""Static mapping, graph partitioning, and sparse matrix block ordering package.""",320 depend=dep,321 system=kargs['system'],322 log=kargs['log'],323 reinstall=kargs['reinstall'],324 actions=(325 ('IsInstalled', { 'filename' :326 [osp.join('__setup.installdir__', 'lib', 'libptesmumps.a'),327 osp.join('__setup.installdir__', 'lib', 'libesmumps.a'),328 osp.join('__setup.installdir__', 'lib', 'libscotch.a'),329 osp.join('__setup.installdir__', 'lib', 'libptscotch.a'),330 osp.join('__setup.installdir__', 'lib', 'libptscotcherr.a'),331 osp.join('__setup.installdir__', 'lib', 'libscotcherrexit.a'),332 osp.join('__setup.installdir__', 'lib', 'libptscotcherrexit.a'),333 osp.join('__setup.installdir__', 'lib', 'libscotchmetis.a'),334 osp.join('__setup.installdir__', 'lib', 'libptscotchparmetis.a'),335 osp.join('__setup.installdir__', 'include', 'scotchf.h'),336 osp.join('__setup.installdir__', 'include', 'ptscotchf.h'),337 osp.join('__setup.installdir__', 'include', 'scotch.h'),338 osp.join('__setup.installdir__', 'include', 'ptscotch.h') ]339 } ),340 ('Extract', {}),341 ('Configure', {342 'command': 'mv src/Makefile.inc src/Makefile.inc.orig ; '343 'cp src/Makefile.aster_full src/Makefile.inc',344 }),345 ('ChgFiles', {346 'files' : [osp.join('src', 'Makefile.inc'), ],347 'dtrans' : scotch_cfg,348 }),349 # remove librt on darwin350 cfg['PLATFORM'] != 'darwin' and (None, None) or \351 ('ChgFiles', {352 'files' : [osp.join('src', 'Makefile.inc'), ],353 'delimiter' : '',354 'dtrans' : { re.escape('-lrt'): ''},355 }),356 ('Make', {357 'path' : osp.join('__setup.workdir__', '__setup.content__', 'src'),358 'nbcpu' : 2, # seems not support "-j NBCPU" option359 }),360 # only if version >= 6361 version.startswith('5') and (None, None) or \362 ('Make', {363 'command': 'make ptesmumps',364 'path' : osp.join('__setup.workdir__', '__setup.content__', 'src'),365 # 'nbcpu' : 8, # seems not support "-j NBCPU" option366 }),367 ('Install', {'command' : 'make install prefix=%s' % cfg['HOME_SCOTCH'],368 'path' : osp.join('__setup.workdir__', '__setup.content__', 'src') }),369 ('Clean', {}),370 ),371 installdir = cfg['HOME_SCOTCH'],372 sourcedir = cfg['SOURCEDIR'],373 )374 return setup375#-------------------------------------------------------------------------------376def benchcfg(cfg):377 bench_cfg = {}.fromkeys(['CC', 'FCFLAGS', 'CFLAGS', 'RANLIB'378 ,'HOME_METIS', 'HOME_SCOTCH','HOME_MUMPS'379 ,'LIB_SCOTCH','LIB_METIS','D_SCOTCH','D_METIS'], '')380 bench_cfg.update(cfg)381 bench_cfg['AR']='ar'382 bench_cfg['ARFLAGS']='vr'383 bench_cfg['LINK_FC']=bench_cfg['FC']384 bench_cfg['STLIB_METIS']=""385 bench_cfg['STLIB_SCOTCH']=""386 return bench_cfg387# 44. ----- mumps388def setup_mumps(dep, summary, **kargs):389 cfg=dep.cfg390 product='mumps'391 version = dict_prod[product]392 pkg_name = '%s-%s' % (product, version)393 # ----- add (and check) product dependencies394 dep.Add(product,395 req=['ASTER_ROOT', 'CC', 'F90', 'LD', 'INCLUDE_MUMPS', 'MATHLIB', 'OTHERLIB'],396 set=['HOME_MUMPS',],397 )398 cfg['HOME_MUMPS']=osp.join(cfg['ASTER_ROOT'], 'public', pkg_name)399 bench_cfg=benchcfg(cfg)400 # ----- setup instance401 setup=SETUP(402 product=product,403 version=version,404 description="""MUMPS: a MUltifrontal Massively Parallel sparse direct Solver.""",405 depend=dep,406 system=kargs['system'],407 log=kargs['log'],408 reinstall=kargs['reinstall'],409 actions=(410 ('IsInstalled', { 'filename' :411 [osp.join('__setup.installdir__', 'lib', 'libcmumps.a'),412 osp.join('__setup.installdir__', 'lib', 'libdmumps.a'),413 osp.join('__setup.installdir__', 'lib', 'libmpiseq.a'),414 osp.join('__setup.installdir__', 'lib', 'libmumps_common.a'),415 osp.join('__setup.installdir__', 'lib', 'libpord.a'),416 osp.join('__setup.installdir__', 'lib', 'libsmumps.a'),417 osp.join('__setup.installdir__', 'lib', 'libzmumps.a')]418 } ),419 ('Extract' , {}),420 ('Configure', {421 'command': 'cp Make/Makefile%(ext)s Makefile.inc'%{'ext':cfg['make_extension']},422 }),423 ('ChgFiles', {424 'files' : ['Makefile.inc'],425 'dtrans' : bench_cfg,426 }),427 ('Make' , {428 'command' : 'make alllib',429 'capturestderr' : False,430 }),431 ('Install', {432 'command' : 'cp -r include/ lib/ libseq/ PORD/ Makefile.inc %(dest)s' % {'dest':cfg['HOME_MUMPS']}433 ,434 'capturestderr' : False,435 }),436 ('Clean', {}),437 ),438 clean_actions=(439 ('Configure', { # to force 'ld' temporarily to null440 'external' : set_cfg,441 'dico' : cfg,442 'var' : 'HOME_MUMPS',443 'value' : '',444 }),445 ),446 installdir = cfg['HOME_MUMPS'],447 sourcedir = cfg['SOURCEDIR'],448 )449 return setup450#-------------------------------------------------------------------------------451# 45. ----- mumps benchmark452def setup_mumps_benchmark(dep, summary, **kargs):453 cfg=dep.cfg454 product='mumps_benchmark'455 version = dict_prod[product]456 pkg_name = '%s-%s' % (product, version)457 # ----- add (and check) product dependencies458 dep.Add(product,459 req=['ASTER_ROOT', 'CC', 'F90', 'LD', 'INCLUDE_MUMPS', 'MATHLIB', 'OTHERLIB',460 'HOME_MPI','HOME_MUMPS'],461 set=['HOME_MUMPS_BENCH',],462 )463 cfg['HOME_MUMPS_BENCH']=osp.join(cfg['ASTER_ROOT'], 'public', pkg_name)464 bench_cfg=benchcfg(cfg)465 instruct="cp Make/Makefile.in Makefile"466 # ----- setup instance467 setup=SETUP(468 product=product,469 version=version,470 description="""MUMPS Solver Benchmarks.""",471 depend=dep,472 system=kargs['system'],473 log=kargs['log'],474 reinstall=kargs['reinstall'],475 actions=(476 ('Extract' , {}),477 ('Configure', {478 'command':instruct,479 }),480 ('ChgFiles', {481 'files' : ['Makefile'],482 'dtrans' : bench_cfg,483 }),484 ('Install', {485 'command' : 'cp -r Matrices/ dsimpletest.F *.f '486 'save_sparse.py Makefile %(dest)s/'487 %{'dest':cfg['HOME_MUMPS_BENCH']} ,488 # 'capturestderr' : False,489 }),490 ('Clean', {}),491 ('Make' , {492 'path' : cfg['HOME_MUMPS_BENCH'] ,493 'capturestderr' : False,494 }),495 ),496 clean_actions=(497 ('Configure', { # to force 'ld' temporarily to null498 'external' : set_cfg,499 'dico' : cfg,500 'var' : 'HOME_MUMPS_BENCH',501 'value' : '',502 }),503 ),504 installdir = cfg['HOME_MUMPS_BENCH'],505 sourcedir = cfg['SOURCEDIR'],506 )507 return setup508#-------------------------------------------------------------------------------509# 50. ----- Code_Aster510def write_waf_cfg(self, filename, config, template, **kwargs):511 """Fille and write template into filename"""512 # remove mumps includes513 if config['ASTER_VERSION'].startswith('12.'):514 lines = [i for i in template.splitlines() \515 if not '%(HOME_MUMPS)s/include' in i]516 template = os.linesep.join(lines)517 open(filename, 'wb').write(template % config)518def write_aster_conf(self, filename, config, **kwargs):519 """Write the version info"""520 template = 'vers : %(ASTER_VERSION)s:%(ASTER_VERSION_DIR)s/share/aster\n'521 open(filename, 'wb').write(template % config)522def setup_aster(dep, summary, **kargs):523 cfg=dep.cfg524 product='aster'525 version = dict_prod[product]526 pkg_name = '%s-%s' % (product, version)527 short_version = '.'.join(version.split('.')[:2])528 # ----- add (and check) product dependencies529 dep.Add(product,530 req=['ASTER_ROOT', 'ASTER_VERSION',531 'HOME_PYTHON', 'PYTHON_EXE', 'PYTHONLIB',532 'HOME_MUMPS', 'HOME_MPI', 'INCLUDE_MUMPS', 'HOME_METIS',533 # 'HOME_MED', 'HOME_HDF', 'HOME_MFRONT',534 #'HOME_GMSH', 'HOME_HOMARD', optional535 'LD', 'CC', 'F90', 'CXXLIB', 'OTHERLIB', 'SYSLIB', ],536 reqobj=['file:?ASTER_ROOT?/bin/as_run',537 'file:?ASTER_ROOT?/etc/codeaster/profile.sh'],538 )539 cfg['ASTER_VERSION_DIR'] = osp.join(cfg['ASTER_ROOT'], cfg['ASTER_VERSION'])540 os.environ['ASTER_VERSION_DIR'] = cfg['ASTER_VERSION_DIR']541 cfg['OPT_ENV'] = cfg.get('OPT_ENV', '')542 ftools=kargs['find_tools']543 unexpanded_cfg = unexpandvars(cfg,544 vars=('ASTER_VERSION_DIR', 'ASTER_ROOT'))545 # ensure not to automatically load additional environment in waf546 os.environ['DEVTOOLS_COMPUTER_ID'] = 'aster_full'547 # for external programs (see data/wscript)548 os.environ['METISDIR'] = cfg['HOME_METIS']549 # optional paths550 if cfg.get('HOME_GMSH'):551 os.environ['GMSH_BIN_DIR'] = osp.join(cfg['HOME_GMSH'], 'bin')552 if cfg.get('HOME_HOMARD'):553 os.environ['HOMARD_ASTER_ROOT_DIR'] = cfg['HOME_HOMARD']554 # ----- setup instance555 setup=SETUP(556 product=product,557 version=version,558 description="""Code_Aster finite element method solver.""",559 depend=dep,560 system=kargs['system'],561 log=kargs['log'],562 reinstall=kargs['reinstall'],563 actions=(564 ('IsInstalled', { 'filename' :565 [osp.join('__setup.installdir__', cfg['ASTER_VERSION'], 'bin', 'aster'),566 osp.join('__setup.installdir__', cfg['ASTER_VERSION'], 'include', 'aster', 'aster.h'),567 osp.join('__setup.installdir__', cfg['ASTER_VERSION'], 'lib', 'aster', 'aster_core.py'),568 osp.join('__setup.installdir__', cfg['ASTER_VERSION'], 'share', 'aster', 'config.txt'), ]569 } ),570 ('Extract' , {}),571 ('Configure', {572 'external' : write_waf_cfg,573 'template' : waf_template,574 'filename' : 'wafcfg/aster_full_config.py',575 'config' : cfg,576 }),577 ('Configure', {578 'command' : './waf configure --use-config=aster_full_config '579 ' --install-tests --prefix=%(ASTER_VERSION_DIR)s' % cfg,580 'capturestderr' : False,581 }),582 ('Make' , {583 'command' : './waf build',584 'capturestderr' : False,585 }),586 ('Install' , {587 'command' : './waf install',588 'capturestderr' : False,589 }),590 ('Configure', {591 'external' : write_waf_cfg,592 'template' : waf_template,593 'filename' : osp.join(cfg['ASTER_VERSION_DIR'], 'share', 'aster',594 'aster_full_config.py'),595 'config' : cfg,596 }),597 ('Configure', {598 'external' : write_waf_cfg,599 'template' : mfront_env_template,600 'filename' : osp.join(cfg['ASTER_VERSION_DIR'], 'share', 'aster',601 'profile_mfront.sh'),602 'config' : cfg,603 }),604 # remove version with same name605 ('ChgFiles' , {606 'files' : ['aster'],607 'path' : osp.join(cfg['ASTER_ROOT'],'etc','codeaster'),608 'dtrans' : {'^ *vers : %s(|:.*)\n' % cfg['ASTER_VERSLABEL'] : '',609 },610 'delimiter' : '',611 'keep' : True,612 'ext' : '.install_'+cfg['ASTER_VERSION'],613 }),614 # add testing/stable version in the aster version file615 ('ChgFiles' , {616 'files' : ['aster'],617 'path' : osp.join(cfg['ASTER_ROOT'],'etc','codeaster'),618 'dtrans' : {619 re.escape('?vers : VVV?') : \620 '?vers : VVV?\n'621 'vers : %(ASTER_VERSLABEL)s:%(ASTER_VERSION_DIR)s/share/aster' % cfg,622 },623 'delimiter' : '', # that's why some ? have been added above624 'keep' : False,625 }),626 # add numbered version in the aster.conf file627 ('ChgFiles' , {628 'external' : write_aster_conf,629 'filename' : osp.join(cfg['ASTER_VERSION_DIR'], 'aster.conf'),630 'config' : cfg,631 }),632 ('Clean', {}),633 ),634 installdir = cfg['ASTER_ROOT'],635 sourcedir = cfg['SOURCEDIR'],636 )...
ArduinoBoardManager.py
Source:ArduinoBoardManager.py
1# -*- coding: utf-8 -*-2# MLC (Machine Learning Control): A genetic algorithm library to solve chaotic problems3# Copyright (C) 2015-2017, Thomas Duriez (thomas.duriez@gmail.com)4# Copyright (C) 2015, Adrian Durán (adrianmdu@gmail.com)5# Copyright (C) 2015-2017, Ezequiel Torres Feyuk (ezequiel.torresfeyuk@gmail.com)6# Copyright (C) 2016-2017, Marco Germano Zbrun (marco.germano@intraway.com)7# Copyright (C) 2016-2017, Raúl Lopez Skuba (raulopez0@gmail.com)8#9# This program is free software: you can redistribute it and/or modify10# it under the terms of the GNU General Public License as published by11# the Free Software Foundation, either version 3 of the License, or12# (at your option) any later version.13#14# This program is distributed in the hope that it will be useful,15# but WITHOUT ANY WARRANTY; without even the implied warranty of16# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the17# GNU General Public License for more details.18#19# You should have received a copy of the GNU General Public License20# along with this program. If not, see <http://www.gnu.org/licenses/>21from ArduinoBench import ArduinoBench22from MLC.GUI.Experiment.ArduinoConfigManager.ArduinoStatsDialog import ArduinoStatsDialog23from MLC.GUI.Experiment.ArduinoConfigManager.BoardConfigurationWindow import BoardConfigurationWindow24from MLC.arduino import boards25from MLC.arduino.connection.serialconnection import SerialConnection, SerialConnectionConfig26from MLC.arduino.protocol import ProtocolConfig, init_interface27from MLC.arduino.connection.base import ConnectionException, ConnectionTimeoutException28from PyQt5.QtWidgets import QMessageBox29import serial30import threading31class ArduinoBoardManager:32 def __init__(self, protocol_config, serial_config, close_handler, parent_win=None):33 self.__setup = protocol_config34 self.__connection_config = serial_config35 self.__main_window = BoardConfigurationWindow(self, boards.types, self.__setup, parent=parent_win)36 self.__connectino_status = None37 self.PARITY_BITS = [serial.PARITY_NONE, serial.PARITY_EVEN,38 serial.PARITY_EVEN, serial.PARITY_MARK, serial.PARITY_SPACE]39 self.STOP_BITS = [serial.STOPBITS_ONE, serial.STOPBITS_ONE_POINT_FIVE, serial.STOPBITS_TWO]40 self.BYTE_SIZE = [serial.EIGHTBITS, serial.FIVEBITS, serial.SIXBITS, serial.SEVENBITS]41 # FIXME the connection with the handler shold be made by a method of the window42 self.__main_window.on_close_signal.connect(close_handler)43 def get_protocol_config(self):44 return self.__setup45 def get_connection_config(self):46 current_setup = self.__main_window.checkout_connection_config()47 config = SerialConnectionConfig(port=current_setup["port"],48 baudrate=current_setup["baudrate"],49 parity=self.PARITY_BITS[current_setup["parity"]],50 stopbits=self.STOP_BITS[current_setup["stopbits"]],51 bytesize=self.BYTE_SIZE[current_setup["bytesize"]])52 return config53 def start_connection(self):54 # TODO Este metodo debe estar enlazado a la opcion de conexion serie55 self.__connection_config = self.get_connection_config()56 return SerialConnection(**self.__connection_config._asdict())57 def start(self):58 self.__main_window.show()59 def insert_digital_pin(self, pin_index, pin, type_idx):60 if pin_index < 0:61 return62 current = self.__main_window.get_current_board()["DIGITAL_PINS"] if type_idx != 2 else \63 self.__main_window.get_current_board()["PWM_PINS"]64 target_pin = self.__setup.digital_input_pins if type_idx == 0 else \65 self.__setup.digital_output_pins if type_idx == 1 else self.__setup.pwm_pins66 if pin in current and pin not in self.__setup.digital_input_pins and pin not in self.__setup.digital_output_pins \67 and pin not in self.__setup.pwm_pins:68 target_pin.append(pin)69 self.__main_window.addDigitalPin(pin_index, type_idx)70 else:71 self.show_error(72 "Error", "Assign error", "Could not set pin %s with the selected type" % (pin),73 QMessageBox.Critical, QMessageBox.Ok)74 # Mover a la vista75 def show_error(self, title, text, info, icon, buttons):76 msg = QMessageBox()77 msg.setIcon(icon)78 msg.setText(text)79 msg.setInformativeText(info)80 msg.setWindowTitle(title)81 msg.setStandardButtons(buttons)82 return msg.exec_()83 def remove_digital_pin(self, pin):84 if pin in self.__setup.digital_input_pins:85 self.__setup.digital_input_pins.remove(pin)86 if pin in self.__setup.digital_output_pins:87 self.__setup.digital_output_pins.remove(int(pin))88 if pin in self.__setup.pwm_pins:89 self.__setup.pwm_pins.remove(int(pin))90 def insert_analog_pin(self, pin_index, pin, type_idx):91 if pin_index < 0:92 return93 current = self.__main_window.get_current_board()["ANALOG_PINS"]94 target_pin = self.__setup.analog_input_pins if type_idx == 0 else self.__setup.analog_output_pins95 if pin in current and pin not in self.__setup.analog_input_pins and pin not in self.__setup.analog_output_pins:96 target_pin.append(pin)97 self.__main_window.addAnalogPin(pin_index, type_idx)98 else:99 self.show_error(100 "Error", "Assign error", "Could not set pin %d with the selected type" % (pin),101 QMessageBox.Critical, QMessageBox.Ok)102 def remove_analog_pin(self, pin):103 if pin in self.__setup.analog_input_pins:104 self.__setup.analog_input_pins.remove(pin)105 if pin in self.__setup.analog_output_pins:106 self.__setup.analog_output_pins.remove(pin)107 def check_connection(self):108 self.__connection_status = self.__main_window.create_connection_dialog()109 conn = self.start_connection()110 conn_checker = threading.Thread(target=self.conn_check, args=[conn])111 conn_checker.start()112 self.__connection_status.exec_()113 conn.wake_up()114 conn_checker.join()115 def conn_check(self, conn):116 try:117 config = ProtocolConfig(conn)118 arduino_if = init_interface(config)119 version = arduino_if.get_version()120 self.__connection_status.set_ok()121 except ConnectionTimeoutException:122 self.__connection_status.set_error("Error: connection timeout")123 except ConnectionException:124 self.__connection_status.set_error("Error: Board unreachable")125 except ValueError, err:126 self.__connection_status.set_error("Error: {0}".format(err))127 def board_changed(self, new_idx, old_idx):128 ret = QMessageBox.Yes129 if self.__setup.digital_input_pins or self.__setup.digital_output_pins or \130 self.__setup.analog_input_pins or self.__setup.analog_output_pins or self.__setup.pwm_pins:131 ret = self.show_error(132 "Warning", "Configuration reset", "Changing the board will reset all I/O pins configuration! Continue?",133 QMessageBox.Critical, QMessageBox.Yes | QMessageBox.No)134 if ret == QMessageBox.Yes:135 del self.__setup.digital_input_pins[:]136 del self.__setup.digital_output_pins[:]137 del self.__setup.analog_input_pins[:]138 del self.__setup.analog_output_pins[:]139 del self.__setup.pwm_pins[:]140 self.__setup = self.__setup._replace(board_type=boards.types[new_idx],141 analog_resolution=boards.types[new_idx]["ANALOG_DEFAULT_RESOLUTION"])142 self.__main_window.set_board(new_idx)143 self.__main_window.update(self.__setup)144 return new_idx145 else:146 self.__main_window.set_board(old_idx)147 return old_idx148 def start_bench(self):149 try:150 self.__setup = self.__setup._replace(connection=self.start_connection(),151 **self.__main_window.checkout_board_setup())152 except SerialConnectionException:153 self.show_error(154 "Error", "Connection failure", "Could not start connection to board",155 QMessageBox.Critical, QMessageBox.Ok)156 return157 bench = ArduinoBench()158 stats = ArduinoStatsDialog(bench)159 stats.connect_to_reset(bench)160 bench.add_observer(stats)161 bench.start(self.__setup)162 stats.exec_()163 bench.stop()164 def autodetect_board(self):165 board_id = boards.detect_board()166 if board_id and board_id != self.__main_window.current_board_idx():167 self.board_changed(board_id, self.__main_window.current_board_idx())168 return board_id169 def update_analog_resolution(self, value):170 self.__setup = self.__setup._replace(analog_resolution=value)171class EventScheduler:172 def __init__(self):173 self.stopped = False174 self.queue = []175 self.tasks_presents = threading.Condition()176 def start(self):177 self.thread = threading.Thread(target=self.svc)178 self.thread.start()179 def svc(self):180 while not self.stopped:181 with self.tasks_presents:182 if not self.queue and not self.stopped:183 self.tasks_presents.wait()184 else:185 for i in self.queue:186 i()187 del self.queue[:]188 def push_task(self, task):189 with self.tasks_presents:190 self.queue.append(task)191 self.tasks_presents.notify()192 def stop(self):193 with self.tasks_presents:194 self.stopped = True195 self.tasks_presents.notify()...
accelerate_fft_build.py
Source:accelerate_fft_build.py
1from cffi import FFI2ffibuilder = FFI()3# cdef() expects a single string declaring the C types, functions and4# globals needed to use the shared object. It must be in valid C syntax.5ffibuilder.cdef(""" 6 7typedef unsigned long vDSP_Length;8typedef long long vDSP_Stride;9typedef struct DSPComplex {10 float real;11 float imag;12} DSPComplex;13typedef struct DSPDoubleComplex {14 double real;15 double imag;16} DSPDoubleComplex;17typedef struct DSPSplitComplex {18 float * realp;19 float * imagp;20} DSPSplitComplex;21typedef struct DSPDoubleSplitComplex {22 double * realp;23 double * imagp;24} DSPDoubleSplitComplex;25typedef int FFTDirection;26typedef int FFTRadix;27enum {28 kFFTDirection_Forward = +1,29 kFFTDirection_Inverse = -130};31enum {32 kFFTRadix2 = 0,33 kFFTRadix3 = 1,34 kFFTRadix5 = 235};36enum {37 vDSP_HALF_WINDOW = 1,38 vDSP_HANN_DENORM = 0,39 vDSP_HANN_NORM = 240};41 42typedef struct OpaqueFFTSetup *FFTSetup;43typedef struct OpaqueFFTSetupD *FFTSetupD;44extern FFTSetup vDSP_create_fftsetup(45 vDSP_Length __Log2n,46 FFTRadix __Radix)47 ;48void vDSP_destroy_fftsetup( FFTSetup __setup)49 ;50FFTSetupD vDSP_create_fftsetupD(vDSP_Length __Log2n, FFTRadix __Radix);51void vDSP_destroy_fftsetupD(FFTSetupD __setup);52extern void vDSP_ctoz(53 const DSPComplex *__C,54 vDSP_Stride __IC,55 const DSPSplitComplex *__Z,56 vDSP_Stride __IZ,57 vDSP_Length __N)58 ;59extern void vDSP_ztoc(60 const DSPSplitComplex *__Z,61 vDSP_Stride __IZ,62 DSPComplex *__C,63 vDSP_Stride __IC,64 vDSP_Length __N)65 ;66void vDSP_ctozD(const DSPDoubleComplex *__C, vDSP_Stride __IC, const DSPDoubleSplitComplex *__Z, vDSP_Stride __IZ, vDSP_Length __N);67void vDSP_ztocD(const DSPDoubleSplitComplex *__Z, vDSP_Stride __IZ, DSPDoubleComplex *__C, vDSP_Stride __IC, vDSP_Length __N);68void vDSP_fft_zipt(FFTSetup __Setup, const DSPSplitComplex *__C, vDSP_Stride __IC, const DSPSplitComplex *__Buffer, vDSP_Length __Log2N, FFTDirection __Direction);69void vDSP_fft_ziptD(FFTSetupD __Setup, const DSPDoubleSplitComplex *__C, vDSP_Stride __IC, const DSPDoubleSplitComplex *__Buffer, vDSP_Length __Log2N, FFTDirection __Direction);70void vDSP_fft_zrip(FFTSetup __Setup, const DSPSplitComplex *__C, vDSP_Stride __IC, vDSP_Length __Log2N, FFTDirection __Direction);71void vDSP_fft_zripD(FFTSetupD __Setup, const DSPDoubleSplitComplex *__C, vDSP_Stride __IC, vDSP_Length __Log2N, FFTDirection __Direction);72void vDSP_fft_zip(FFTSetup __Setup, const DSPSplitComplex *__C, vDSP_Stride __IC, vDSP_Length __Log2N, FFTDirection __Direction);73void vDSP_fft_zipD(FFTSetupD __Setup, const DSPDoubleSplitComplex *__C, vDSP_Stride __IC, vDSP_Length __Log2N, FFTDirection __Direction);74void vDSP_fft2d_zip(FFTSetup __Setup, const DSPSplitComplex *__C, vDSP_Stride __IC0, vDSP_Stride __IC1, vDSP_Length __Log2N0, vDSP_Length __Log2N1, FFTDirection __Direction);75void vDSP_fft2d_zipD(FFTSetupD __Setup, const DSPDoubleSplitComplex *__C, vDSP_Stride __IC0, vDSP_Stride __IC1, vDSP_Length __Log2N0, vDSP_Length __Log2N1, FFTDirection __Direction);76 77extern void vDSP_fft_zop(78 FFTSetup __Setup,79 const DSPSplitComplex *__A,80 vDSP_Stride __IA,81 const DSPSplitComplex *__C,82 vDSP_Stride __IC,83 vDSP_Length __Log2N,84 FFTDirection __Direction);85extern void vDSP_fft_zopD(86 FFTSetupD __Setup,87 const DSPDoubleSplitComplex *__A,88 vDSP_Stride __IA,89 const DSPDoubleSplitComplex *__C,90 vDSP_Stride __IC,91 vDSP_Length __Log2N,92 FFTDirection __Direction);93 94void vDSP_fft2d_zripD(FFTSetupD __Setup, const DSPDoubleSplitComplex *__C, vDSP_Stride __IC0, vDSP_Stride __IC1, vDSP_Length __Log2N0, vDSP_Length __Log2N1, FFTDirection __flag);95void vDSP_fft2d_zrip(FFTSetup __Setup, const DSPSplitComplex *__C, vDSP_Stride __IC0, vDSP_Stride __IC1, vDSP_Length __Log2N0, vDSP_Length __Log2N1, FFTDirection __Direction);96void vDSP_fft2d_zop(FFTSetup __Setup, const DSPSplitComplex *__A, vDSP_Stride __IA0, vDSP_Stride __IA1, const DSPSplitComplex *__C, vDSP_Stride __IC0, vDSP_Stride __IC1, vDSP_Length __Log2N0, vDSP_Length __Log2N1, FFTDirection __Direction);97void vDSP_fft2d_zopD(FFTSetupD __Setup, const DSPDoubleSplitComplex *__A, vDSP_Stride __IA0, vDSP_Stride __IA1, const DSPDoubleSplitComplex *__C, vDSP_Stride __IC0, vDSP_Stride __IC1, vDSP_Length __Log2N0, vDSP_Length __Log2N1, FFTDirection __Direction);98void vDSP_fft2d_zrop(FFTSetup __Setup, const DSPSplitComplex *__A, vDSP_Stride __IA0, vDSP_Stride __IA1, const DSPSplitComplex *__C, vDSP_Stride __IC0, vDSP_Stride __IC1, vDSP_Length __Log2N0, vDSP_Length __Log2N1, FFTDirection __Direction);99void vDSP_fft2d_zropD(FFTSetupD __Setup, const DSPDoubleSplitComplex *__A, vDSP_Stride __IA0, vDSP_Stride __IA1, const DSPDoubleSplitComplex *__C, vDSP_Stride __IC0, vDSP_Stride __IC1, vDSP_Length __Log2N0, vDSP_Length __Log2N1, FFTDirection __Direction);100void vDSP_fftm_zip(FFTSetup __Setup, const DSPSplitComplex *__C, vDSP_Stride __IC, vDSP_Stride __IM, vDSP_Length __Log2N, vDSP_Length __M, FFTDirection __Direction);101void vDSP_fftm_zipD(FFTSetupD __Setup, const DSPDoubleSplitComplex *__C, vDSP_Stride __IC, vDSP_Stride __IM, vDSP_Length __Log2N, vDSP_Length __M, FFTDirection __Direction);102void vDSP_fftm_zop(FFTSetup __Setup, const DSPSplitComplex *__A, vDSP_Stride __IA, vDSP_Stride __IMA, const DSPSplitComplex *__C, vDSP_Stride __IC, vDSP_Stride __IMC, vDSP_Length __Log2N, vDSP_Length __M, FFTDirection __Direction);103void vDSP_fftm_zopD(FFTSetupD __Setup, const DSPDoubleSplitComplex *__A, vDSP_Stride __IA, vDSP_Stride __IMA, const DSPDoubleSplitComplex *__C, vDSP_Stride __IC, vDSP_Stride __IMC, vDSP_Length __Log2N, vDSP_Length __M, FFTDirection __Direction);104void vDSP_fftm_zrip(FFTSetup __Setup, const DSPSplitComplex *__C, vDSP_Stride __IC, vDSP_Stride __IM, vDSP_Length __Log2N, vDSP_Length __M, FFTDirection __Direction);105void vDSP_fftm_zripD(FFTSetupD __Setup, const DSPDoubleSplitComplex *__C, vDSP_Stride __IC, vDSP_Stride __IM, vDSP_Length __Log2N, vDSP_Length __M, FFTDirection __Direction);106void vDSP_fftm_zrop(FFTSetup __Setup, const DSPSplitComplex *__A, vDSP_Stride __IA, vDSP_Stride __IMA, const DSPSplitComplex *__C, vDSP_Stride __IC, vDSP_Stride __IMC, vDSP_Length __Log2N, vDSP_Length __M, FFTDirection __Direction);107void vDSP_fftm_zropD(FFTSetupD __Setup, const DSPDoubleSplitComplex *__A, vDSP_Stride __IA, vDSP_Stride __IMA, const DSPDoubleSplitComplex *__C, vDSP_Stride __IC, vDSP_Stride __IMC, vDSP_Length __Log2N, vDSP_Length __M, FFTDirection __Direction);108 """)109ffibuilder.set_source("_accelerate_fft_cffi",110"""111 #include <Accelerate/Accelerate.h> // the C header of the library112"""113#,extra_link_args=["-framework Accelerate"]114#,115 #,libraries=['framework Accelerate']116 ) # library name, for the linker117if __name__ == "__main__":118 ffibuilder.compile(verbose=True)119 ...
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