How to use isAtomic method in root

Best JavaScript code snippet using root

properties.ts

Source:properties.ts

...29    // Conformation30    x: p(l => l.unit.conformation.x(l.element)),31    y: p(l => l.unit.conformation.y(l.element)),32    z: p(l => l.unit.conformation.z(l.element)),33    id: p(l => !Unit.isAtomic(l.unit) ? notAtomic() : l.unit.model.atomicConformation.atomId.value(l.element)),34    occupancy: p(l => !Unit.isAtomic(l.unit) ?  notAtomic() : l.unit.model.atomicConformation.occupancy.value(l.element)),35    B_iso_or_equiv: p(l => !Unit.isAtomic(l.unit) ?  notAtomic() : l.unit.model.atomicConformation.B_iso_or_equiv.value(l.element)),36    sourceIndex: p(l => Unit.isAtomic(l.unit)37        ? l.unit.model.atomicHierarchy.atomSourceIndex.value(l.element)38        // TODO: when implemented, this should map to the source index.39        : l.element),40    // Hierarchy41    type_symbol: p(l => !Unit.isAtomic(l.unit) ? notAtomic() : l.unit.model.atomicHierarchy.atoms.type_symbol.value(l.element)),42    label_atom_id: p(l => !Unit.isAtomic(l.unit) ? notAtomic() : l.unit.model.atomicHierarchy.atoms.label_atom_id.value(l.element)),43    auth_atom_id: p(l => !Unit.isAtomic(l.unit) ? notAtomic() : l.unit.model.atomicHierarchy.atoms.auth_atom_id.value(l.element)),44    label_alt_id: p(l => !Unit.isAtomic(l.unit) ? notAtomic() : l.unit.model.atomicHierarchy.atoms.label_alt_id.value(l.element)),45    label_comp_id: p(compId),46    auth_comp_id: p(l => !Unit.isAtomic(l.unit) ? notAtomic() : l.unit.model.atomicHierarchy.atoms.auth_comp_id.value(l.element)),47    pdbx_formal_charge: p(l => !Unit.isAtomic(l.unit) ? notAtomic() : l.unit.model.atomicHierarchy.atoms.pdbx_formal_charge.value(l.element)),48    // Derived49    vdw_radius: p(l => !Unit.isAtomic(l.unit) ? notAtomic() : VdwRadius(l.unit.model.atomicHierarchy.atoms.type_symbol.value(l.element))),50};51function compId(l: StructureElement.Location) {52    if (!Unit.isAtomic(l.unit)) notAtomic();53    return l.unit.model.atomicHierarchy.atoms.label_comp_id.value(l.element);54}55function seqId(l: StructureElement.Location) {56    return !Unit.isAtomic(l.unit) ? notAtomic() : l.unit.model.atomicHierarchy.residues.label_seq_id.value(l.unit.residueIndex[l.element]);57}58function hasMicroheterogeneity(l: StructureElement.Location) {59    if (!Unit.isAtomic(l.unit)) notAtomic();60    const entitySeq = l.unit.model.sequence.byEntityKey[eK(l)];61    return entitySeq && entitySeq.sequence.microHet.has(seqId(l));62}63function microheterogeneityCompIds(l: StructureElement.Location) {64    if (!Unit.isAtomic(l.unit)) notAtomic();65    const entitySeq = l.unit.model.sequence.byEntityKey[eK(l)];66    if (entitySeq) {67        return entitySeq.sequence.microHet.get(seqId(l)) || [compId(l)];68    } else {69        return [compId(l)];70    }71}72const residue = {73    key: p(l => !Unit.isAtomic(l.unit) ? notAtomic() : l.unit.residueIndex[l.element]),74    group_PDB: p(l => !Unit.isAtomic(l.unit) ? notAtomic() : l.unit.model.atomicHierarchy.residues.group_PDB.value(l.unit.residueIndex[l.element])),75    label_seq_id: p(seqId),76    auth_seq_id: p(l => !Unit.isAtomic(l.unit) ? notAtomic() : l.unit.model.atomicHierarchy.residues.auth_seq_id.value(l.unit.residueIndex[l.element])),77    pdbx_PDB_ins_code: p(l => !Unit.isAtomic(l.unit) ? notAtomic() : l.unit.model.atomicHierarchy.residues.pdbx_PDB_ins_code.value(l.unit.residueIndex[l.element])),78    // Properties79    isNonStandard: p(l => !Unit.isAtomic(l.unit) ? notAtomic() : microheterogeneityCompIds(l).some(c => l.unit.model.properties.chemicalComponentMap.get(c)!.mon_nstd_flag[0] === 'n')),80    hasMicroheterogeneity: p(hasMicroheterogeneity),81    microheterogeneityCompIds: p(microheterogeneityCompIds),82    secondary_structure_type: p(l => {83        if (!Unit.isAtomic(l.unit)) notAtomic();84        const secStruc = SecondaryStructureProvider.get(l.structure).value?.get(l.unit.invariantId);85        return secStruc?.type[l.unit.residueIndex[l.element]] ?? SecondaryStructureType.Flag.NA;86    }),87    secondary_structure_key: p(l => {88        if (!Unit.isAtomic(l.unit)) notAtomic();89        const secStruc = SecondaryStructureProvider.get(l.structure).value?.get(l.unit.invariantId);90        return secStruc?.key[l.unit.residueIndex[l.element]] ?? -1;91    }),92    chem_comp_type: p(l => !Unit.isAtomic(l.unit) ? notAtomic() : l.unit.model.properties.chemicalComponentMap.get(compId(l))!.type),93};94const chain = {95    key: p(l => !Unit.isAtomic(l.unit) ? notAtomic() : l.unit.chainIndex[l.element]),96    label_asym_id: p(l => !Unit.isAtomic(l.unit) ? notAtomic() : l.unit.model.atomicHierarchy.chains.label_asym_id.value(l.unit.chainIndex[l.element])),97    auth_asym_id: p(l => !Unit.isAtomic(l.unit) ? notAtomic() : l.unit.model.atomicHierarchy.chains.auth_asym_id.value(l.unit.chainIndex[l.element])),98    label_entity_id: p(l => !Unit.isAtomic(l.unit) ? notAtomic() : l.unit.model.atomicHierarchy.chains.label_entity_id.value(l.unit.chainIndex[l.element]))99};100const coarse = {101    key: atom.key,102    entityKey: p(l => !Unit.isCoarse(l.unit) ? notCoarse() : l.unit.coarseElements.entityKey[l.element]),103    x: atom.x,104    y: atom.y,105    z: atom.z,106    asym_id: p(l => !Unit.isCoarse(l.unit) ? notCoarse() : l.unit.coarseElements.asym_id.value(l.element)),107    seq_id_begin: p(l => !Unit.isCoarse(l.unit) ? notCoarse() : l.unit.coarseElements.seq_id_begin.value(l.element)),108    seq_id_end: p(l => !Unit.isCoarse(l.unit) ? notCoarse() : l.unit.coarseElements.seq_id_end.value(l.element)),109    sphere_radius: p(l => !Unit.isSpheres(l.unit) ? notCoarse('spheres') : l.unit.coarseConformation.radius[l.element]),110    sphere_rmsf: p(l => !Unit.isSpheres(l.unit) ? notCoarse('spheres') : l.unit.coarseConformation.rmsf[l.element]),111    gaussian_weight: p(l => !Unit.isGaussians(l.unit) ? notCoarse('gaussians') : l.unit.coarseConformation.weight[l.element]),112    gaussian_covariance_matrix: p(l => !Unit.isGaussians(l.unit) ? notCoarse('gaussians') : l.unit.coarseConformation.covariance_matrix[l.element])...

FormattedSegment.js

Source:FormattedSegment.js

1'use strict';2const AtomicText = 'â²';3const Empty = {};4export default class FormattedSegment {5  /**6   * A formatted string consists of a sequence of formatted segments.7   * Each segment is expected to have an unique id (one is generated if not provided)8   * The flow mode is expected to capture the information on whether the segment is considered inline or block etc.9   * The isAtomic flag is used to determine if it is expected to be treated as one block of object for editing purposes.10   * The renderInfo is an opaque object that holds info on how to render this segment.11   *12   * This class is not sealed and it is acceptable for callers to override this and pass that to FormattedString.13   * @namespace string.formatted14   * @class FormattedSegment15   * @constructor16   */17  constructor({id=this.generateId(), text='', renderInfo=Empty, flowMode, isAtomic=false}) {18    this.id = id;19    this.text = text;20    this.flowMode = flowMode;21    this.isAtomic = isAtomic;22    this.renderInfo = renderInfo;23    if (isAtomic && !text) {24      this.text = AtomicText;25    }26    this.count = this.text.length;27  }28  /**29   * Returns a new segment which has the updated styles.30   * @method updateStyles31   * @param {Function|Object} styleUpdator - if this is an object, it is merged into the current renderInfo.32   * If a function is passed in as the styleUpdator param, it is called with the old renderInfo and is expected to return the new renderInfo.33   * @return FormattedSegment or this if there is no update34   */35  updateStyles(styleUpdator) {36    const updator = typeof styleUpdator == 'object' ? old => Object.assign({}, old, styleUpdator) : styleUpdator;37    const renderInfo = updator(this.renderInfo, this);38    if (renderInfo === this.renderInfo) return this;39    return new this.constructor({text: this.text, flowMode: this.flowMode, isAtomic: this.isAtomic, renderInfo});40  }41  /**42   * Returns a new segment that holds a slice of the contents of this with the same rendering43   * It is  an error to try to slice into an atomic segment.44   * @method slice45   * @param {Number} start46   * @param {Number} end47   */48  slice(start, end) {49    const min = Math.max(0, Math.min(start, end, this.count));50    const max = Math.min(this.count, Math.max(start, end, 0));51    if (min === 0 && max === this.count) return this;52    if (this.isAtomic) throw new Error('Cannot slice atomic entries');53    const text = this.text.slice(min, max);54    const flowMode = this.flowMode;55    const isAtomic = this.isAtomic;56    return new this.constructor({text, renderInfo: this.renderInfo, flowMode, isAtomic});57  }58  /**59   * Splices a piece of text into the current segment.  It is an error to splice into an atomic segment.60   * @method splice61   * @param {Number} start62   * @param {Number} deleteCount63   * @param {String} insertText - note that this is not a var-args and cannot be any type other than string.64   */65  splice(start, deleteCount, insertText='') {66    if (this.isAtomic) throw new Error('Cannot splice into atomic segments');67    const text = this.text.slice(0, start) + insertText + this.text.slice(start + deleteCount);68    const flowMode = this.flowMode;69    const isAtomic = this.isAtomic;70    return new this.constructor({text, renderInfo: this.renderInfo, flowMode, isAtomic});71  }72  /**73   * Converts this segment to the string.  Derived classes can override this safely.74   * Default implementation simply returns the text basis with a special character (â²) for atomic objects.75   * @method toString76   */77  toString() {78    return this.text;79  }80  /**81   * Render the contents of this in the preferred mime type.82   * This is a generic function that can be used to render text, HTML or even React.83   * @method render84   */85  render(context, mimeType='text/plain') {86    if (mimeType === 'text/plain') return this.toString();87  }88  /**89   * Generates a unique id for use with this segment.  Derived classes can overrid this safely.90   * @method generateId91   */92  generateId() {93    return'id' + Date.now().toString() + Math.floor(Math.random(1000)).toString();94  }95  /**96   * Creates text segments.97   * @method createTextSegment98   * @static99   */100  static createTextSegment(text, renderInfo) {101    return new this({text, renderInfo});102  }103  /**104   * Creates embedded (atomic) objects.105   * @method createEmbed106   * @static107   */108  static createEmbed(flowMode, renderInfo) {109    return new this({text: AtomicText, flowMode, renderInfo});110  }...

Using AI Code Generation

1var root = require('./root');2console.log(root.isAtomic(5));3console.log(root.isAtomic('5'));4console.log(root.isAtomic(5.5));5console.log(root.isAtomic('5.5'));6console.log(root.isAtomic(false));7console.log(root.isAtomic('false'));8console.log(root.isAtomic(true));9console.log(root.isAtomic('true'));10console.log(root.isAtomic(null));11console.log(root.isAtomic('null'));12console.log(root.isAtomic(undefined));13console.log(root.isAtomic('undefined'));14console.log(root.isAtomic({}));15console.log(root.isAtomic([]));16console.log(root.isAtomic(function(){}));17console.log(root.isAtomic(new Date()));18console.log(root.isAtomic(/a/));19console.log(root.isAtomic(new RegExp('a')));20console.log(root.isAtomic(new Error('a')));21console.log(root.isAtomic(new String('a')));22console.log(root.isAtomic(new Number(5)));23console.log(root.isAtomic(new Boolean(true)));

Using AI Code Generation

1var rootNode = require('./rootNode');2rootNode.isAtomic('a');3rootNode.isAtomic('b');4rootNode.isAtomic('c');5rootNode.isAtomic('d');6rootNode.isAtomic('e');7rootNode.isAtomic('f');8rootNode.isAtomic('g');9rootNode.isAtomic('h');10rootNode.isAtomic('i');11rootNode.isAtomic('j');12rootNode.isAtomic('k');13rootNode.isAtomic('l');14rootNode.isAtomic('m');15rootNode.isAtomic('n');16rootNode.isAtomic('o');17rootNode.isAtomic('p');18rootNode.isAtomic('q');19rootNode.isAtomic('r');20rootNode.isAtomic('s');21rootNode.isAtomic('t');22rootNode.isAtomic('u');23rootNode.isAtomic('v');24rootNode.isAtomic('w');25rootNode.isAtomic('x');26rootNode.isAtomic('y');27rootNode.isAtomic('z');28rootNode.isAtomic('A');29rootNode.isAtomic('B');30rootNode.isAtomic('C');31rootNode.isAtomic('D');32rootNode.isAtomic('E');33rootNode.isAtomic('F');34rootNode.isAtomic('G');35rootNode.isAtomic('H');36rootNode.isAtomic('I');37rootNode.isAtomic('J');38rootNode.isAtomic('K');39rootNode.isAtomic('L');40rootNode.isAtomic('M');41rootNode.isAtomic('N');42rootNode.isAtomic('O');43rootNode.isAtomic('P');44rootNode.isAtomic('Q');45rootNode.isAtomic('R');46rootNode.isAtomic('S');47rootNode.isAtomic('T');48rootNode.isAtomic('U');49rootNode.isAtomic('V');50rootNode.isAtomic('W');51rootNode.isAtomic('X');52rootNode.isAtomic('Y');53rootNode.isAtomic('Z');54rootNode.isAtomic('0');55rootNode.isAtomic('1');56rootNode.isAtomic('2');57rootNode.isAtomic('3');58rootNode.isAtomic('4');59rootNode.isAtomic('5');60rootNode.isAtomic('6');61rootNode.isAtomic('7');62rootNode.isAtomic('8');63rootNode.isAtomic('9');64rootNode.isAtomic('-');65rootNode.isAtomic('_');66rootNode.isAtomic(':');67rootNode.isAtomic('.');68rootNode.isAtomic(' ');69rootNode.isAtomic('!');70rootNode.isAtomic('#');71rootNode.isAtomic('$');72rootNode.isAtomic('%');

Using AI Code Generation

1var root = require('root');2var isAtomic = root.isAtomic;3var result = isAtomic(1);4var isAtomic = function(value) {5    return value === null || value === undefined || typeof value === 'string' || typeof value === 'number' || typeof value === 'boolean';6};7module.exports = {8};9module.exports = isAtomic;10module.exports = {11};12module.exports = isAtomic;13module.exports = {14};

Using AI Code Generation

1var root = require('./root.js');2var num = 10;3if(root.isAtomic(num))4{5	console.log("Atomic");6}7{8	console.log("Not Atomic");9}10var isAtomic = function(num)11{12	if(num == 0 || num == 1) return false;13	for(var i = 2; i < num; i++)14	{15		if(num%i == 0) return false;16	}17	return true;18}19module.exports.isAtomic = isAtomic;20var isAtomic = function(num)21{22	if(num == 0 || num == 1) return false;23	for(var i = 2; i < num; i++)24	{25		if(num%i == 0) return false;26	}27	return true;28}29exports.isAtomic = isAtomic;30The require is a function that you use to include modules that exist in separate files. The require function allows you to include modules that are present in separate files. You can include core Node.js modules, community-based modules (node_modules), and local modules. For example, if you want to include the root.js file, you can do it as follows:31var root = require('./root.js');32var num = 10;33if(root.isAtomic(num))34{35	console.log("Atomic");36}37{38	console.log("Not Atomic");39}

Using AI Code Generation

1var isAtomic = require('is-atomic');2var obj = 1;3var result = isAtomic(obj);4console.log(result);5var isAtomic = require('is-atomic');6var obj = 1;7var result = isAtomic.isAtomic(obj);8console.log(result);

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